Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04733 and H281DRAFT_04734 are separated by 173 nucleotides H281DRAFT_04734 and H281DRAFT_04735 are separated by 139 nucleotides H281DRAFT_04735 and H281DRAFT_04736 are separated by 342 nucleotides
H281DRAFT_04733: H281DRAFT_04733 - Protein of unknown function (DUF3318), at 142,073 to 142,546
_04733
H281DRAFT_04734: H281DRAFT_04734 - Uncharacterized membrane protein YqjE, at 142,720 to 143,106
_04734
H281DRAFT_04735: H281DRAFT_04735 - Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family, at 143,246 to 143,548
_04735
H281DRAFT_04736: H281DRAFT_04736 - Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin), at 143,891 to 144,529
_04736
Position (kb)
143
144 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 142.315 kb on + strand, within H281DRAFT_04733 at 142.464 kb on - strand, within H281DRAFT_04733 at 142.561 kb on - strand at 142.561 kb on - strand at 142.650 kb on + strand at 142.650 kb on + strand at 142.651 kb on - strand at 142.651 kb on - strand at 142.651 kb on - strand at 142.722 kb on - strand at 142.728 kb on + strand at 142.728 kb on + strand at 142.729 kb on - strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.877 kb on + strand, within H281DRAFT_04734 at 142.877 kb on + strand, within H281DRAFT_04734 at 142.878 kb on - strand, within H281DRAFT_04734 at 143.070 kb on + strand at 143.070 kb on + strand at 143.074 kb on + strand at 143.074 kb on + strand at 143.075 kb on - strand at 143.165 kb on - strand at 143.219 kb on + strand at 143.219 kb on + strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.328 kb on + strand, within H281DRAFT_04735 at 143.329 kb on - strand, within H281DRAFT_04735 at 143.710 kb on - strand at 143.710 kb on - strand at 143.749 kb on + strand at 143.776 kb on + strand at 143.776 kb on + strand at 143.781 kb on + strand at 143.781 kb on + strand at 143.782 kb on - strand at 143.807 kb on + strand at 143.808 kb on - strand at 143.822 kb on - strand at 143.828 kb on + strand at 143.828 kb on + strand at 143.828 kb on + strand at 143.829 kb on - strand at 143.829 kb on - strand at 143.874 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.879 kb on - strand at 143.879 kb on - strand at 143.898 kb on + strand at 143.941 kb on + strand at 144.014 kb on - strand, within H281DRAFT_04736 at 144.213 kb on - strand, within H281DRAFT_04736 at 144.302 kb on - strand, within H281DRAFT_04736 at 144.302 kb on - strand, within H281DRAFT_04736 at 144.302 kb on - strand, within H281DRAFT_04736 at 144.305 kb on + strand, within H281DRAFT_04736 at 144.349 kb on - strand, within H281DRAFT_04736 at 144.349 kb on - strand, within H281DRAFT_04736 at 144.480 kb on - strand at 144.497 kb on + strand at 144.497 kb on + strand at 144.498 kb on - strand at 144.527 kb on + strand at 144.527 kb on + strand at 144.527 kb on + strand at 144.528 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 142,315 + H281DRAFT_04733 0.51 +1.8 142,464 - H281DRAFT_04733 0.82 +1.1 142,561 - -0.5 142,561 - -0.5 142,650 + +0.4 142,650 + +0.8 142,651 - +0.5 142,651 - -1.4 142,651 - -0.5 142,722 - +0.3 142,728 + +0.8 142,728 + +2.0 142,729 - +0.4 142,735 + +1.3 142,735 + +1.4 142,735 + +3.0 142,735 + +1.2 142,735 + +0.7 142,877 + H281DRAFT_04734 0.41 +2.4 142,877 + H281DRAFT_04734 0.41 +1.4 142,878 - H281DRAFT_04734 0.41 +1.8 143,070 + +2.8 143,070 + +1.6 143,074 + +1.6 143,074 + +3.2 143,075 - +1.6 143,165 - +0.4 143,219 + +2.3 143,219 + +1.5 143,248 - +0.9 143,248 - +0.8 143,248 - +0.1 143,248 - +0.1 143,328 + H281DRAFT_04735 0.27 +2.3 143,329 - H281DRAFT_04735 0.27 +2.7 143,710 - +0.2 143,710 - +0.4 143,749 + +1.2 143,776 + +0.4 143,776 + -0.6 143,781 + +0.4 143,781 + +0.4 143,782 - -0.6 143,807 + +0.7 143,808 - -1.9 143,822 - +0.1 143,828 + +2.1 143,828 + -0.3 143,828 + +0.7 143,829 - -0.8 143,829 - +0.3 143,874 + +0.9 143,878 + -0.2 143,878 + +1.1 143,878 + +0.2 143,879 - -0.3 143,879 - -1.4 143,898 + -0.4 143,941 + +0.6 144,014 - H281DRAFT_04736 0.19 -1.4 144,213 - H281DRAFT_04736 0.50 -0.8 144,302 - H281DRAFT_04736 0.64 +0.6 144,302 - H281DRAFT_04736 0.64 -0.1 144,302 - H281DRAFT_04736 0.64 -0.3 144,305 + H281DRAFT_04736 0.65 -1.3 144,349 - H281DRAFT_04736 0.72 -0.4 144,349 - H281DRAFT_04736 0.72 -1.5 144,480 - -0.0 144,497 + -1.9 144,497 + -0.9 144,498 - -0.7 144,527 + +1.7 144,527 + -0.0 144,527 + -2.6 144,528 - +0.4
Or see this region's nucleotide sequence