Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04730 and H281DRAFT_04731 overlap by 4 nucleotides H281DRAFT_04731 and H281DRAFT_04732 are separated by 10 nucleotides H281DRAFT_04732 and H281DRAFT_04733 are separated by 101 nucleotides H281DRAFT_04733 and H281DRAFT_04734 are separated by 173 nucleotides
H281DRAFT_04730: H281DRAFT_04730 - type IV pilus assembly protein PilW, at 140,088 to 140,900
_04730
H281DRAFT_04731: H281DRAFT_04731 - hypothetical protein, at 140,897 to 141,529
_04731
H281DRAFT_04732: H281DRAFT_04732 - type IV pilus assembly protein PilE, at 141,540 to 141,971
_04732
H281DRAFT_04733: H281DRAFT_04733 - Protein of unknown function (DUF3318), at 142,073 to 142,546
_04733
H281DRAFT_04734: H281DRAFT_04734 - Uncharacterized membrane protein YqjE, at 142,720 to 143,106
_04734
Position (kb) 141
142 Strain fitness (log2 ratio) -1
0
1
2
3 at 140.670 kb on + strand, within H281DRAFT_04730 at 140.671 kb on - strand, within H281DRAFT_04730 at 140.671 kb on - strand, within H281DRAFT_04730 at 140.671 kb on - strand, within H281DRAFT_04730 at 140.876 kb on + strand at 140.877 kb on - strand at 140.877 kb on - strand at 140.880 kb on + strand at 140.881 kb on - strand at 140.892 kb on - strand at 140.892 kb on - strand at 140.911 kb on - strand at 141.292 kb on + strand, within H281DRAFT_04731 at 141.293 kb on - strand, within H281DRAFT_04731 at 141.293 kb on - strand, within H281DRAFT_04731 at 141.404 kb on + strand, within H281DRAFT_04731 at 141.405 kb on - strand, within H281DRAFT_04731 at 141.450 kb on + strand, within H281DRAFT_04731 at 141.451 kb on - strand, within H281DRAFT_04731 at 141.537 kb on + strand at 141.537 kb on + strand at 141.537 kb on + strand at 141.537 kb on + strand at 141.537 kb on + strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.557 kb on - strand at 141.557 kb on - strand at 141.634 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.912 kb on - strand, within H281DRAFT_04732 at 141.979 kb on + strand at 141.980 kb on - strand at 142.104 kb on + strand at 142.104 kb on + strand at 142.105 kb on - strand at 142.315 kb on + strand, within H281DRAFT_04733 at 142.464 kb on - strand, within H281DRAFT_04733 at 142.561 kb on - strand at 142.561 kb on - strand at 142.650 kb on + strand at 142.650 kb on + strand at 142.651 kb on - strand at 142.651 kb on - strand at 142.651 kb on - strand at 142.722 kb on - strand at 142.728 kb on + strand at 142.728 kb on + strand at 142.729 kb on - strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.877 kb on + strand, within H281DRAFT_04734 at 142.877 kb on + strand, within H281DRAFT_04734 at 142.878 kb on - strand, within H281DRAFT_04734
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 140,670 + H281DRAFT_04730 0.72 -1.2 140,671 - H281DRAFT_04730 0.72 -0.3 140,671 - H281DRAFT_04730 0.72 -0.5 140,671 - H281DRAFT_04730 0.72 -0.3 140,876 + -0.5 140,877 - +0.1 140,877 - +0.3 140,880 + +2.1 140,881 - +0.3 140,892 - -0.7 140,892 - +0.2 140,911 - +0.1 141,292 + H281DRAFT_04731 0.62 -0.2 141,293 - H281DRAFT_04731 0.63 +1.8 141,293 - H281DRAFT_04731 0.63 -0.4 141,404 + H281DRAFT_04731 0.80 -0.3 141,405 - H281DRAFT_04731 0.80 +0.2 141,450 + H281DRAFT_04731 0.87 -0.4 141,451 - H281DRAFT_04731 0.88 +0.0 141,537 + +0.6 141,537 + +0.1 141,537 + +0.5 141,537 + +0.6 141,537 + -0.4 141,538 - +0.1 141,538 - +0.5 141,538 - -0.3 141,538 - -0.9 141,538 - -1.7 141,538 - -0.4 141,538 - +0.8 141,538 - -0.2 141,557 - +1.2 141,557 - +0.0 141,634 - H281DRAFT_04732 0.22 +0.4 141,794 - H281DRAFT_04732 0.59 +0.3 141,794 - H281DRAFT_04732 0.59 +0.4 141,794 - H281DRAFT_04732 0.59 +0.2 141,794 - H281DRAFT_04732 0.59 -0.3 141,794 - H281DRAFT_04732 0.59 +1.1 141,794 - H281DRAFT_04732 0.59 -0.5 141,794 - H281DRAFT_04732 0.59 +0.5 141,794 - H281DRAFT_04732 0.59 +0.0 141,912 - H281DRAFT_04732 0.86 -0.7 141,979 + -0.9 141,980 - -0.3 142,104 + +0.9 142,104 + +0.1 142,105 - -0.3 142,315 + H281DRAFT_04733 0.51 +1.8 142,464 - H281DRAFT_04733 0.82 +1.1 142,561 - -0.5 142,561 - -0.5 142,650 + +0.4 142,650 + +0.8 142,651 - +0.5 142,651 - -1.4 142,651 - -0.5 142,722 - +0.3 142,728 + +0.8 142,728 + +2.0 142,729 - +0.4 142,735 + +1.3 142,735 + +1.4 142,735 + +3.0 142,735 + +1.2 142,735 + +0.7 142,877 + H281DRAFT_04734 0.41 +2.4 142,877 + H281DRAFT_04734 0.41 +1.4 142,878 - H281DRAFT_04734 0.41 +1.8
Or see this region's nucleotide sequence