Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04632 and H281DRAFT_04633 are separated by 102 nucleotides H281DRAFT_04633 and H281DRAFT_04634 are separated by 309 nucleotides H281DRAFT_04634 and H281DRAFT_04635 are separated by 60 nucleotides H281DRAFT_04635 and H281DRAFT_04636 are separated by 9 nucleotides
H281DRAFT_04632: H281DRAFT_04632 - LysR family transcriptional regulator, glycine cleavage system transcriptional activator, at 30,527 to 31,447
_04632
H281DRAFT_04633: H281DRAFT_04633 - (3S)-malyl-CoA thioesterase, at 31,550 to 31,945
_04633
H281DRAFT_04634: H281DRAFT_04634 - ATP-binding cassette, subfamily B, at 32,255 to 34,144
_04634
H281DRAFT_04635: H281DRAFT_04635 - Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon), at 34,205 to 34,912
_04635
H281DRAFT_04636: H281DRAFT_04636 - hypothetical protein, at 34,922 to 36,034
_04636
Position (kb)
32
33
34
35 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 31.316 kb on + strand, within H281DRAFT_04632 at 31.329 kb on - strand, within H281DRAFT_04632 at 31.392 kb on + strand at 31.392 kb on + strand at 31.393 kb on - strand at 31.412 kb on + strand at 31.413 kb on - strand at 31.413 kb on - strand at 31.476 kb on + strand at 31.476 kb on + strand at 31.477 kb on - strand at 31.477 kb on - strand at 31.487 kb on + strand at 31.488 kb on - strand at 31.498 kb on + strand at 31.498 kb on + strand at 31.499 kb on - strand at 31.499 kb on - strand at 31.507 kb on + strand at 31.602 kb on + strand, within H281DRAFT_04633 at 31.602 kb on + strand, within H281DRAFT_04633 at 31.602 kb on + strand, within H281DRAFT_04633 at 31.602 kb on + strand, within H281DRAFT_04633 at 31.603 kb on - strand, within H281DRAFT_04633 at 31.622 kb on + strand, within H281DRAFT_04633 at 31.651 kb on + strand, within H281DRAFT_04633 at 31.651 kb on + strand, within H281DRAFT_04633 at 31.651 kb on + strand, within H281DRAFT_04633 at 31.662 kb on + strand, within H281DRAFT_04633 at 31.662 kb on + strand, within H281DRAFT_04633 at 31.663 kb on - strand, within H281DRAFT_04633 at 31.691 kb on - strand, within H281DRAFT_04633 at 31.829 kb on - strand, within H281DRAFT_04633 at 31.937 kb on - strand at 31.937 kb on - strand at 32.007 kb on - strand at 32.126 kb on + strand at 32.127 kb on - strand at 32.339 kb on + strand at 32.339 kb on + strand at 32.351 kb on + strand at 32.351 kb on + strand at 32.352 kb on - strand at 32.352 kb on - strand at 32.434 kb on + strand at 32.434 kb on + strand at 32.435 kb on - strand at 32.435 kb on - strand at 32.435 kb on - strand at 32.560 kb on + strand, within H281DRAFT_04634 at 32.561 kb on - strand, within H281DRAFT_04634 at 32.820 kb on - strand, within H281DRAFT_04634 at 32.820 kb on - strand, within H281DRAFT_04634 at 32.828 kb on + strand, within H281DRAFT_04634 at 32.828 kb on + strand, within H281DRAFT_04634 at 32.828 kb on + strand, within H281DRAFT_04634 at 32.828 kb on + strand, within H281DRAFT_04634 at 32.828 kb on + strand, within H281DRAFT_04634 at 32.864 kb on + strand at 32.865 kb on - strand, within H281DRAFT_04634 at 32.865 kb on - strand, within H281DRAFT_04634 at 32.972 kb on + strand, within H281DRAFT_04634 at 32.972 kb on + strand, within H281DRAFT_04634 at 32.972 kb on + strand, within H281DRAFT_04634 at 32.973 kb on - strand, within H281DRAFT_04634 at 32.973 kb on - strand, within H281DRAFT_04634 at 32.973 kb on - strand, within H281DRAFT_04634 at 33.215 kb on + strand, within H281DRAFT_04634 at 33.215 kb on + strand, within H281DRAFT_04634 at 33.217 kb on + strand, within H281DRAFT_04634 at 33.218 kb on - strand, within H281DRAFT_04634 at 33.218 kb on - strand, within H281DRAFT_04634 at 33.389 kb on + strand, within H281DRAFT_04634 at 33.427 kb on + strand, within H281DRAFT_04634 at 33.512 kb on + strand, within H281DRAFT_04634 at 33.544 kb on + strand, within H281DRAFT_04634 at 33.547 kb on + strand, within H281DRAFT_04634 at 33.644 kb on + strand, within H281DRAFT_04634 at 33.647 kb on + strand, within H281DRAFT_04634 at 33.647 kb on + strand, within H281DRAFT_04634 at 33.647 kb on + strand, within H281DRAFT_04634 at 33.647 kb on + strand at 33.648 kb on - strand, within H281DRAFT_04634 at 33.749 kb on + strand, within H281DRAFT_04634 at 33.750 kb on - strand, within H281DRAFT_04634 at 34.278 kb on + strand at 34.278 kb on + strand, within H281DRAFT_04635 at 34.323 kb on + strand, within H281DRAFT_04635 at 34.932 kb on + strand at 35.108 kb on - strand, within H281DRAFT_04636 at 35.108 kb on - strand, within H281DRAFT_04636 at 35.143 kb on - strand, within H281DRAFT_04636
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 31,316 + H281DRAFT_04632 0.86 -0.2 31,329 - H281DRAFT_04632 0.87 -0.0 31,392 + +0.4 31,392 + -0.8 31,393 - -0.1 31,412 + +0.6 31,413 - -0.2 31,413 - +0.4 31,476 + -1.0 31,476 + -0.4 31,477 - +0.2 31,477 - +0.0 31,487 + +0.1 31,488 - -0.2 31,498 + -0.5 31,498 + -0.0 31,499 - -0.3 31,499 - +0.2 31,507 + -2.1 31,602 + H281DRAFT_04633 0.13 +0.3 31,602 + H281DRAFT_04633 0.13 +0.2 31,602 + H281DRAFT_04633 0.13 -0.6 31,602 + H281DRAFT_04633 0.13 -1.2 31,603 - H281DRAFT_04633 0.13 -0.3 31,622 + H281DRAFT_04633 0.18 -0.2 31,651 + H281DRAFT_04633 0.26 +0.2 31,651 + H281DRAFT_04633 0.26 -1.3 31,651 + H281DRAFT_04633 0.26 -0.3 31,662 + H281DRAFT_04633 0.28 +1.8 31,662 + H281DRAFT_04633 0.28 +0.2 31,663 - H281DRAFT_04633 0.29 -1.7 31,691 - H281DRAFT_04633 0.36 -2.6 31,829 - H281DRAFT_04633 0.70 +0.9 31,937 - -0.9 31,937 - -0.4 32,007 - -0.4 32,126 + -0.3 32,127 - -0.5 32,339 + -1.2 32,339 + -0.8 32,351 + +2.3 32,351 + +0.3 32,352 - -1.2 32,352 - -0.9 32,434 + -0.0 32,434 + -0.5 32,435 - -0.0 32,435 - +0.3 32,435 - +0.0 32,560 + H281DRAFT_04634 0.16 +0.5 32,561 - H281DRAFT_04634 0.16 +0.7 32,820 - H281DRAFT_04634 0.30 -0.8 32,820 - H281DRAFT_04634 0.30 +1.9 32,828 + H281DRAFT_04634 0.30 +0.2 32,828 + H281DRAFT_04634 0.30 +0.9 32,828 + H281DRAFT_04634 0.30 +0.9 32,828 + H281DRAFT_04634 0.30 +0.9 32,828 + H281DRAFT_04634 0.30 -0.6 32,864 + -1.2 32,865 - H281DRAFT_04634 0.32 +0.3 32,865 - H281DRAFT_04634 0.32 -0.5 32,972 + H281DRAFT_04634 0.38 -0.3 32,972 + H281DRAFT_04634 0.38 -0.4 32,972 + H281DRAFT_04634 0.38 -0.3 32,973 - H281DRAFT_04634 0.38 +0.6 32,973 - H281DRAFT_04634 0.38 +0.2 32,973 - H281DRAFT_04634 0.38 +1.0 33,215 + H281DRAFT_04634 0.51 -0.9 33,215 + H281DRAFT_04634 0.51 -0.7 33,217 + H281DRAFT_04634 0.51 +0.8 33,218 - H281DRAFT_04634 0.51 -1.0 33,218 - H281DRAFT_04634 0.51 -0.0 33,389 + H281DRAFT_04634 0.60 +0.4 33,427 + H281DRAFT_04634 0.62 -0.3 33,512 + H281DRAFT_04634 0.67 +0.4 33,544 + H281DRAFT_04634 0.68 -1.2 33,547 + H281DRAFT_04634 0.68 -0.8 33,644 + H281DRAFT_04634 0.73 +0.7 33,647 + H281DRAFT_04634 0.74 +0.3 33,647 + H281DRAFT_04634 0.74 -1.3 33,647 + H281DRAFT_04634 0.74 -0.8 33,647 + -0.5 33,648 - H281DRAFT_04634 0.74 -0.6 33,749 + H281DRAFT_04634 0.79 +0.2 33,750 - H281DRAFT_04634 0.79 -1.7 34,278 + +4.5 34,278 + H281DRAFT_04635 0.10 +2.0 34,323 + H281DRAFT_04635 0.17 +4.2 34,932 + +1.1 35,108 - H281DRAFT_04636 0.17 +0.7 35,108 - H281DRAFT_04636 0.17 -1.2 35,143 - H281DRAFT_04636 0.20 +1.8
Or see this region's nucleotide sequence