Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04620 and H281DRAFT_04621 are separated by 113 nucleotides H281DRAFT_04621 and H281DRAFT_04622 overlap by 4 nucleotides H281DRAFT_04622 and H281DRAFT_04623 are separated by 356 nucleotides
H281DRAFT_04620: H281DRAFT_04620 - aspartyl-tRNA synthetase, at 13,567 to 15,366
_04620
H281DRAFT_04621: H281DRAFT_04621 - dihydroneopterin triphosphate pyrophosphatase, at 15,480 to 16,073
_04621
H281DRAFT_04622: H281DRAFT_04622 - putative cardiolipin synthase, at 16,070 to 17,329
_04622
H281DRAFT_04623: H281DRAFT_04623 - transcriptional regulator, TetR family, at 17,686 to 18,285
_04623
Position (kb) 16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 15.345 kb on + strand at 15.443 kb on + strand at 15.458 kb on - strand at 15.458 kb on - strand at 15.555 kb on + strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.620 kb on - strand, within H281DRAFT_04621 at 15.620 kb on - strand, within H281DRAFT_04621 at 15.635 kb on + strand, within H281DRAFT_04621 at 15.635 kb on + strand, within H281DRAFT_04621 at 15.635 kb on + strand, within H281DRAFT_04621 at 15.636 kb on - strand, within H281DRAFT_04621 at 15.636 kb on - strand, within H281DRAFT_04621 at 15.636 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.908 kb on - strand, within H281DRAFT_04621 at 15.975 kb on + strand, within H281DRAFT_04621 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.254 kb on - strand, within H281DRAFT_04622 at 16.254 kb on - strand, within H281DRAFT_04622 at 16.412 kb on + strand, within H281DRAFT_04622 at 16.412 kb on + strand, within H281DRAFT_04622 at 16.547 kb on + strand, within H281DRAFT_04622 at 16.817 kb on + strand, within H281DRAFT_04622 at 16.818 kb on - strand, within H281DRAFT_04622 at 16.868 kb on + strand, within H281DRAFT_04622 at 16.869 kb on - strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.908 kb on - strand, within H281DRAFT_04622 at 16.992 kb on - strand, within H281DRAFT_04622 at 17.128 kb on + strand, within H281DRAFT_04622 at 17.128 kb on + strand, within H281DRAFT_04622 at 17.137 kb on + strand, within H281DRAFT_04622 at 17.137 kb on + strand, within H281DRAFT_04622 at 17.231 kb on + strand at 17.232 kb on - strand at 17.232 kb on - strand at 17.232 kb on - strand at 17.276 kb on + strand at 17.286 kb on - strand at 17.435 kb on + strand at 17.583 kb on - strand at 17.599 kb on + strand at 17.599 kb on + strand at 17.599 kb on + strand at 17.600 kb on - strand at 17.600 kb on - strand at 17.669 kb on + strand at 17.669 kb on + strand at 17.669 kb on + strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.677 kb on + strand at 17.866 kb on + strand, within H281DRAFT_04623 at 17.866 kb on + strand, within H281DRAFT_04623 at 17.866 kb on + strand, within H281DRAFT_04623 at 17.867 kb on - strand, within H281DRAFT_04623 at 17.867 kb on - strand, within H281DRAFT_04623 at 17.995 kb on + strand, within H281DRAFT_04623 at 17.996 kb on - strand, within H281DRAFT_04623 at 18.017 kb on - strand, within H281DRAFT_04623
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 15,345 + -1.1 15,443 + +2.1 15,458 - +0.8 15,458 - +0.6 15,555 + H281DRAFT_04621 0.13 -0.2 15,556 - H281DRAFT_04621 0.13 +0.6 15,556 - H281DRAFT_04621 0.13 +1.3 15,556 - H281DRAFT_04621 0.13 -0.9 15,556 - H281DRAFT_04621 0.13 +0.0 15,556 - H281DRAFT_04621 0.13 +0.5 15,620 - H281DRAFT_04621 0.24 +1.3 15,620 - H281DRAFT_04621 0.24 +0.6 15,635 + H281DRAFT_04621 0.26 +1.5 15,635 + H281DRAFT_04621 0.26 -1.7 15,635 + H281DRAFT_04621 0.26 -0.7 15,636 - H281DRAFT_04621 0.26 +0.1 15,636 - H281DRAFT_04621 0.26 +0.4 15,636 - H281DRAFT_04621 0.26 -0.3 15,844 - H281DRAFT_04621 0.61 +0.7 15,844 - H281DRAFT_04621 0.61 +1.5 15,844 - H281DRAFT_04621 0.61 +1.1 15,844 - H281DRAFT_04621 0.61 +0.3 15,907 + H281DRAFT_04621 0.72 +0.1 15,907 + H281DRAFT_04621 0.72 +0.5 15,907 + H281DRAFT_04621 0.72 +0.3 15,907 + H281DRAFT_04621 0.72 +0.4 15,908 - H281DRAFT_04621 0.72 +0.6 15,975 + H281DRAFT_04621 0.83 +0.3 16,253 + H281DRAFT_04622 0.15 +0.0 16,253 + H281DRAFT_04622 0.15 +0.0 16,253 + H281DRAFT_04622 0.15 +0.2 16,253 + H281DRAFT_04622 0.15 +0.1 16,253 + H281DRAFT_04622 0.15 -0.3 16,254 - H281DRAFT_04622 0.15 +0.1 16,254 - H281DRAFT_04622 0.15 +0.2 16,412 + H281DRAFT_04622 0.27 +0.8 16,412 + H281DRAFT_04622 0.27 +0.8 16,547 + H281DRAFT_04622 0.38 +0.7 16,817 + H281DRAFT_04622 0.59 +1.3 16,818 - H281DRAFT_04622 0.59 -1.5 16,868 + H281DRAFT_04622 0.63 +3.7 16,869 - H281DRAFT_04622 0.63 -1.2 16,907 + H281DRAFT_04622 0.66 -0.3 16,907 + H281DRAFT_04622 0.66 +0.1 16,907 + H281DRAFT_04622 0.66 +0.0 16,907 + H281DRAFT_04622 0.66 +0.1 16,908 - H281DRAFT_04622 0.67 +0.4 16,992 - H281DRAFT_04622 0.73 +0.2 17,128 + H281DRAFT_04622 0.84 +0.2 17,128 + H281DRAFT_04622 0.84 -1.2 17,137 + H281DRAFT_04622 0.85 +1.0 17,137 + H281DRAFT_04622 0.85 -1.3 17,231 + -0.2 17,232 - +0.1 17,232 - +0.3 17,232 - -1.5 17,276 + -2.4 17,286 - +0.3 17,435 + +0.3 17,583 - -0.8 17,599 + +0.3 17,599 + +0.6 17,599 + +2.7 17,600 - +0.8 17,600 - -1.0 17,669 + +0.4 17,669 + -0.6 17,669 + +0.0 17,670 - +0.1 17,670 - +0.3 17,670 - +1.5 17,670 - -0.7 17,670 - +0.8 17,677 + -0.1 17,866 + H281DRAFT_04623 0.30 -2.7 17,866 + H281DRAFT_04623 0.30 -0.8 17,866 + H281DRAFT_04623 0.30 +0.4 17,867 - H281DRAFT_04623 0.30 -1.6 17,867 - H281DRAFT_04623 0.30 -0.6 17,995 + H281DRAFT_04623 0.52 +0.2 17,996 - H281DRAFT_04623 0.52 -0.4 18,017 - H281DRAFT_04623 0.55 +0.1
Or see this region's nucleotide sequence