Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04547 and H281DRAFT_04548 are separated by 13 nucleotides H281DRAFT_04548 and H281DRAFT_04549 are separated by 16 nucleotides H281DRAFT_04549 and H281DRAFT_04550 overlap by 4 nucleotides H281DRAFT_04550 and H281DRAFT_04551 are separated by 355 nucleotides
H281DRAFT_04547: H281DRAFT_04547 - Uncharacterized membrane protein YckC, RDD family, at 279,789 to 280,346
_04547
H281DRAFT_04548: H281DRAFT_04548 - Protein of unknown function (DUF3106), at 280,360 to 281,118
_04548
H281DRAFT_04549: H281DRAFT_04549 - Protein of unknown function (DUF3619), at 281,135 to 281,563
_04549
H281DRAFT_04550: H281DRAFT_04550 - RNA polymerase, sigma-24 subunit, RpoE, at 281,560 to 282,123
_04550
H281DRAFT_04551: H281DRAFT_04551 - acetolactate synthase, large subunit, at 282,479 to 284,242
_04551
Position (kb) 281
282 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 280.222 kb on + strand, within H281DRAFT_04547 at 280.223 kb on - strand, within H281DRAFT_04547 at 280.223 kb on - strand at 281.045 kb on + strand at 281.111 kb on + strand at 281.111 kb on + strand at 281.112 kb on - strand at 281.112 kb on - strand at 281.154 kb on + strand at 281.178 kb on + strand, within H281DRAFT_04549 at 281.204 kb on + strand, within H281DRAFT_04549 at 281.205 kb on - strand, within H281DRAFT_04549 at 281.363 kb on - strand, within H281DRAFT_04549 at 281.563 kb on + strand at 281.564 kb on - strand at 281.679 kb on + strand, within H281DRAFT_04550 at 281.680 kb on - strand, within H281DRAFT_04550 at 281.680 kb on - strand, within H281DRAFT_04550 at 281.680 kb on - strand, within H281DRAFT_04550 at 281.725 kb on + strand, within H281DRAFT_04550 at 281.889 kb on + strand, within H281DRAFT_04550 at 281.889 kb on + strand, within H281DRAFT_04550 at 281.889 kb on + strand, within H281DRAFT_04550 at 281.889 kb on + strand, within H281DRAFT_04550 at 281.889 kb on + strand, within H281DRAFT_04550 at 281.890 kb on - strand, within H281DRAFT_04550 at 281.890 kb on - strand, within H281DRAFT_04550 at 281.890 kb on - strand, within H281DRAFT_04550 at 281.890 kb on - strand, within H281DRAFT_04550 at 281.890 kb on - strand, within H281DRAFT_04550 at 281.940 kb on + strand, within H281DRAFT_04550 at 282.157 kb on - strand at 282.346 kb on + strand at 282.346 kb on + strand at 282.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 280,222 + H281DRAFT_04547 0.78 -0.1 280,223 - H281DRAFT_04547 0.78 +0.7 280,223 - +1.0 281,045 + -0.8 281,111 + -1.4 281,111 + +0.0 281,112 - +0.9 281,112 - +1.1 281,154 + +2.2 281,178 + H281DRAFT_04549 0.10 +1.3 281,204 + H281DRAFT_04549 0.16 +1.7 281,205 - H281DRAFT_04549 0.16 -1.2 281,363 - H281DRAFT_04549 0.53 +0.4 281,563 + +1.1 281,564 - +0.4 281,679 + H281DRAFT_04550 0.21 -0.4 281,680 - H281DRAFT_04550 0.21 +0.1 281,680 - H281DRAFT_04550 0.21 -0.8 281,680 - H281DRAFT_04550 0.21 -2.0 281,725 + H281DRAFT_04550 0.29 -2.3 281,889 + H281DRAFT_04550 0.58 -0.6 281,889 + H281DRAFT_04550 0.58 -1.0 281,889 + H281DRAFT_04550 0.58 +1.0 281,889 + H281DRAFT_04550 0.58 +0.8 281,889 + H281DRAFT_04550 0.58 -3.1 281,890 - H281DRAFT_04550 0.59 -1.3 281,890 - H281DRAFT_04550 0.59 -0.8 281,890 - H281DRAFT_04550 0.59 -0.4 281,890 - H281DRAFT_04550 0.59 -1.7 281,890 - H281DRAFT_04550 0.59 +0.0 281,940 + H281DRAFT_04550 0.67 -1.4 282,157 - -1.1 282,346 + -0.3 282,346 + +0.1 282,346 + -0.6
Or see this region's nucleotide sequence