Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04459 and H281DRAFT_04460 are separated by 63 nucleotides H281DRAFT_04460 and H281DRAFT_04461 are separated by 13 nucleotides H281DRAFT_04461 and H281DRAFT_04462 are separated by 140 nucleotides
H281DRAFT_04459: H281DRAFT_04459 - 5-dehydro-2-deoxygluconokinase, at 181,890 to 183,938
_04459
H281DRAFT_04460: H281DRAFT_04460 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 184,002 to 184,841
_04460
H281DRAFT_04461: H281DRAFT_04461 - monosaccharide ABC transporter membrane protein, CUT2 family, at 184,855 to 186,027
_04461
H281DRAFT_04462: H281DRAFT_04462 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 186,168 to 187,214
_04462
Position (kb) 184
185
186
187 Strain fitness (log2 ratio) -2
-1
0
1 at 184.532 kb on - strand, within H281DRAFT_04460 at 184.883 kb on + strand at 184.928 kb on - strand at 185.580 kb on - strand, within H281DRAFT_04461 at 186.020 kb on - strand at 186.153 kb on - strand at 186.157 kb on - strand at 186.187 kb on + strand at 186.274 kb on + strand, within H281DRAFT_04462 at 186.275 kb on - strand, within H281DRAFT_04462 at 186.386 kb on - strand, within H281DRAFT_04462 at 186.386 kb on - strand, within H281DRAFT_04462 at 186.587 kb on - strand, within H281DRAFT_04462 at 186.650 kb on - strand, within H281DRAFT_04462 at 186.784 kb on + strand, within H281DRAFT_04462 at 186.890 kb on + strand, within H281DRAFT_04462 at 186.891 kb on - strand, within H281DRAFT_04462
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 184,532 - H281DRAFT_04460 0.63 +1.0 184,883 + +0.1 184,928 - -0.4 185,580 - H281DRAFT_04461 0.62 +0.1 186,020 - -0.4 186,153 - -0.6 186,157 - -0.3 186,187 + -0.8 186,274 + H281DRAFT_04462 0.10 -2.0 186,275 - H281DRAFT_04462 0.10 +0.8 186,386 - H281DRAFT_04462 0.21 -0.4 186,386 - H281DRAFT_04462 0.21 +0.5 186,587 - H281DRAFT_04462 0.40 -1.0 186,650 - H281DRAFT_04462 0.46 -0.0 186,784 + H281DRAFT_04462 0.59 -0.3 186,890 + H281DRAFT_04462 0.69 -0.5 186,891 - H281DRAFT_04462 0.69 -1.6
Or see this region's nucleotide sequence