Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04172 and H281DRAFT_04173 are separated by 219 nucleotides H281DRAFT_04173 and H281DRAFT_04174 are separated by 177 nucleotides
H281DRAFT_04172: H281DRAFT_04172 - transcriptional regulator, TetR family, at 289,351 to 289,989
_04172
H281DRAFT_04173: H281DRAFT_04173 - Nicotinamidase-related amidase, at 290,209 to 290,835
_04173
H281DRAFT_04174: H281DRAFT_04174 - Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain, at 291,013 to 292,020
_04174
Position (kb) 290
291 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 289.227 kb on + strand at 289.227 kb on + strand at 289.342 kb on + strand at 289.344 kb on + strand at 289.344 kb on + strand at 289.344 kb on + strand at 289.344 kb on + strand at 289.345 kb on - strand at 289.350 kb on + strand at 289.350 kb on + strand at 289.350 kb on + strand at 289.351 kb on - strand at 289.495 kb on + strand, within H281DRAFT_04172 at 289.772 kb on + strand, within H281DRAFT_04172 at 289.772 kb on + strand, within H281DRAFT_04172 at 289.893 kb on - strand, within H281DRAFT_04172 at 290.020 kb on - strand at 290.020 kb on - strand at 290.020 kb on - strand at 290.263 kb on + strand at 290.278 kb on - strand, within H281DRAFT_04173 at 290.347 kb on + strand, within H281DRAFT_04173 at 290.347 kb on + strand, within H281DRAFT_04173 at 290.478 kb on + strand, within H281DRAFT_04173 at 290.489 kb on + strand, within H281DRAFT_04173 at 290.489 kb on + strand, within H281DRAFT_04173 at 290.490 kb on - strand, within H281DRAFT_04173 at 290.582 kb on + strand, within H281DRAFT_04173 at 290.582 kb on + strand, within H281DRAFT_04173 at 290.582 kb on + strand, within H281DRAFT_04173 at 290.583 kb on - strand, within H281DRAFT_04173 at 290.583 kb on - strand, within H281DRAFT_04173 at 290.583 kb on - strand, within H281DRAFT_04173 at 290.782 kb on + strand at 290.786 kb on + strand at 290.786 kb on + strand at 290.787 kb on - strand at 290.998 kb on + strand at 290.998 kb on + strand at 290.999 kb on - strand at 291.018 kb on + strand at 291.019 kb on - strand at 291.019 kb on - strand at 291.291 kb on + strand, within H281DRAFT_04174 at 291.292 kb on - strand, within H281DRAFT_04174 at 291.380 kb on + strand, within H281DRAFT_04174 at 291.508 kb on + strand, within H281DRAFT_04174 at 291.508 kb on + strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.569 kb on + strand, within H281DRAFT_04174 at 291.569 kb on + strand, within H281DRAFT_04174 at 291.570 kb on - strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 289,227 + +1.9 289,227 + +1.7 289,342 + +2.7 289,344 + +1.2 289,344 + +0.8 289,344 + +2.5 289,344 + -0.5 289,345 - +4.5 289,350 + +0.4 289,350 + +0.3 289,350 + -0.5 289,351 - +5.4 289,495 + H281DRAFT_04172 0.23 +2.6 289,772 + H281DRAFT_04172 0.66 +3.8 289,772 + H281DRAFT_04172 0.66 +2.6 289,893 - H281DRAFT_04172 0.85 +5.8 290,020 - +0.1 290,020 - -0.3 290,020 - -0.2 290,263 + -0.6 290,278 - H281DRAFT_04173 0.11 +0.7 290,347 + H281DRAFT_04173 0.22 +0.6 290,347 + H281DRAFT_04173 0.22 +0.8 290,478 + H281DRAFT_04173 0.43 -1.1 290,489 + H281DRAFT_04173 0.45 -0.1 290,489 + H281DRAFT_04173 0.45 +0.3 290,490 - H281DRAFT_04173 0.45 -0.0 290,582 + H281DRAFT_04173 0.59 +0.0 290,582 + H281DRAFT_04173 0.59 -0.3 290,582 + H281DRAFT_04173 0.59 -0.2 290,583 - H281DRAFT_04173 0.60 -0.4 290,583 - H281DRAFT_04173 0.60 -1.7 290,583 - H281DRAFT_04173 0.60 +0.9 290,782 + +1.0 290,786 + +0.3 290,786 + -1.0 290,787 - +0.5 290,998 + +0.3 290,998 + -1.0 290,999 - +0.9 291,018 + -0.4 291,019 - -0.1 291,019 - +0.4 291,291 + H281DRAFT_04174 0.28 +0.3 291,292 - H281DRAFT_04174 0.28 +0.0 291,380 + H281DRAFT_04174 0.36 +0.3 291,508 + H281DRAFT_04174 0.49 +0.6 291,508 + H281DRAFT_04174 0.49 +1.1 291,509 - H281DRAFT_04174 0.49 +1.5 291,509 - H281DRAFT_04174 0.49 +2.6 291,509 - H281DRAFT_04174 0.49 -0.6 291,509 - H281DRAFT_04174 0.49 +2.6 291,569 + H281DRAFT_04174 0.55 +0.9 291,569 + H281DRAFT_04174 0.55 +2.1 291,570 - H281DRAFT_04174 0.55 -0.0 291,664 + H281DRAFT_04174 0.65 -0.2 291,664 + H281DRAFT_04174 0.65 -1.6 291,664 + H281DRAFT_04174 0.65 +0.1 291,664 + H281DRAFT_04174 0.65 -0.4 291,664 + H281DRAFT_04174 0.65 -0.5 291,665 - H281DRAFT_04174 0.65 +1.0 291,665 - H281DRAFT_04174 0.65 -0.3 291,665 - H281DRAFT_04174 0.65 +0.2 291,665 - H281DRAFT_04174 0.65 -0.2 291,665 - H281DRAFT_04174 0.65 +0.6 291,665 - H281DRAFT_04174 0.65 +0.1 291,665 - H281DRAFT_04174 0.65 +0.2
Or see this region's nucleotide sequence