Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04169 and H281DRAFT_04170 are separated by 1 nucleotides H281DRAFT_04170 and H281DRAFT_04171 are separated by 18 nucleotides
H281DRAFT_04169: H281DRAFT_04169 - outer membrane protein, multidrug efflux system, at 282,922 to 284,451
_04169
H281DRAFT_04170: H281DRAFT_04170 - multidrug efflux pump, at 284,453 to 287,674
_04170
H281DRAFT_04171: H281DRAFT_04171 - membrane fusion protein, multidrug efflux system, at 287,693 to 288,925
_04171
Position (kb) 284
285
286
287
288 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 283.833 kb on + strand, within H281DRAFT_04169 at 283.834 kb on - strand, within H281DRAFT_04169 at 283.834 kb on - strand, within H281DRAFT_04169 at 284.028 kb on - strand, within H281DRAFT_04169 at 284.538 kb on + strand at 284.538 kb on + strand at 284.539 kb on - strand at 284.539 kb on - strand at 284.539 kb on - strand at 284.647 kb on + strand at 285.246 kb on + strand, within H281DRAFT_04170 at 285.246 kb on + strand, within H281DRAFT_04170 at 285.247 kb on - strand, within H281DRAFT_04170 at 285.363 kb on + strand, within H281DRAFT_04170 at 285.377 kb on - strand, within H281DRAFT_04170 at 285.746 kb on + strand, within H281DRAFT_04170 at 285.777 kb on + strand, within H281DRAFT_04170 at 285.777 kb on + strand, within H281DRAFT_04170 at 285.778 kb on - strand, within H281DRAFT_04170 at 285.897 kb on - strand, within H281DRAFT_04170 at 285.897 kb on - strand, within H281DRAFT_04170 at 286.045 kb on - strand, within H281DRAFT_04170 at 286.275 kb on + strand, within H281DRAFT_04170 at 286.280 kb on - strand at 286.608 kb on + strand, within H281DRAFT_04170 at 286.609 kb on - strand, within H281DRAFT_04170 at 286.609 kb on - strand, within H281DRAFT_04170 at 286.728 kb on + strand, within H281DRAFT_04170 at 286.951 kb on + strand, within H281DRAFT_04170 at 287.205 kb on + strand, within H281DRAFT_04170 at 287.206 kb on - strand, within H281DRAFT_04170 at 287.206 kb on - strand, within H281DRAFT_04170 at 287.692 kb on - strand at 287.694 kb on + strand at 287.785 kb on + strand at 287.904 kb on + strand, within H281DRAFT_04171 at 287.904 kb on + strand, within H281DRAFT_04171 at 287.904 kb on + strand, within H281DRAFT_04171 at 287.905 kb on - strand, within H281DRAFT_04171 at 288.172 kb on - strand, within H281DRAFT_04171 at 288.175 kb on + strand, within H281DRAFT_04171 at 288.354 kb on + strand, within H281DRAFT_04171 at 288.355 kb on - strand, within H281DRAFT_04171 at 288.508 kb on - strand, within H281DRAFT_04171 at 288.633 kb on + strand, within H281DRAFT_04171 at 288.633 kb on + strand, within H281DRAFT_04171 at 288.654 kb on + strand, within H281DRAFT_04171
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 283,833 + H281DRAFT_04169 0.60 -1.3 283,834 - H281DRAFT_04169 0.60 -0.6 283,834 - H281DRAFT_04169 0.60 -2.0 284,028 - H281DRAFT_04169 0.72 -1.0 284,538 + -1.7 284,538 + -1.0 284,539 - +4.2 284,539 - +1.4 284,539 - +2.0 284,647 + +4.3 285,246 + H281DRAFT_04170 0.25 +4.3 285,246 + H281DRAFT_04170 0.25 +3.9 285,247 - H281DRAFT_04170 0.25 +3.6 285,363 + H281DRAFT_04170 0.28 +4.2 285,377 - H281DRAFT_04170 0.29 +3.4 285,746 + H281DRAFT_04170 0.40 +4.0 285,777 + H281DRAFT_04170 0.41 +3.1 285,777 + H281DRAFT_04170 0.41 +3.2 285,778 - H281DRAFT_04170 0.41 +3.6 285,897 - H281DRAFT_04170 0.45 +4.1 285,897 - H281DRAFT_04170 0.45 +4.7 286,045 - H281DRAFT_04170 0.49 +4.6 286,275 + H281DRAFT_04170 0.57 +4.3 286,280 - +3.7 286,608 + H281DRAFT_04170 0.67 +3.7 286,609 - H281DRAFT_04170 0.67 +6.2 286,609 - H281DRAFT_04170 0.67 +4.4 286,728 + H281DRAFT_04170 0.71 +4.2 286,951 + H281DRAFT_04170 0.78 +3.7 287,205 + H281DRAFT_04170 0.85 +4.8 287,206 - H281DRAFT_04170 0.85 +4.4 287,206 - H281DRAFT_04170 0.85 +3.2 287,692 - +1.8 287,694 + +4.6 287,785 + +3.7 287,904 + H281DRAFT_04171 0.17 +4.1 287,904 + H281DRAFT_04171 0.17 +4.1 287,904 + H281DRAFT_04171 0.17 +3.8 287,905 - H281DRAFT_04171 0.17 +4.2 288,172 - H281DRAFT_04171 0.39 +4.6 288,175 + H281DRAFT_04171 0.39 +4.2 288,354 + H281DRAFT_04171 0.54 +4.1 288,355 - H281DRAFT_04171 0.54 +4.8 288,508 - H281DRAFT_04171 0.66 +3.6 288,633 + H281DRAFT_04171 0.76 +1.9 288,633 + H281DRAFT_04171 0.76 +4.3 288,654 + H281DRAFT_04171 0.78 +3.0
Or see this region's nucleotide sequence