Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04138 and H281DRAFT_04139 overlap by 14 nucleotides H281DRAFT_04139 and H281DRAFT_04140 are separated by 231 nucleotides H281DRAFT_04140 and H281DRAFT_04141 are separated by 41 nucleotides H281DRAFT_04141 and H281DRAFT_04142 are separated by 129 nucleotides
H281DRAFT_04138: H281DRAFT_04138 - Uncharacterized conserved protein YecE, DUF72 family, at 248,539 to 249,945
_04138
H281DRAFT_04139: H281DRAFT_04139 - peptide-methionine (S)-S-oxide reductase, at 249,932 to 250,480
_04139
H281DRAFT_04140: H281DRAFT_04140 - NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family, at 250,712 to 251,245
_04140
H281DRAFT_04141: H281DRAFT_04141 - transcriptional regulator, AsnC family, at 251,287 to 251,802
_04141
H281DRAFT_04142: H281DRAFT_04142 - Kynurenine formamidase, at 251,932 to 252,570
_04142
Position (kb) 250
251
252 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 249.785 kb on - strand, within H281DRAFT_04138 at 250.032 kb on + strand, within H281DRAFT_04139 at 250.044 kb on + strand, within H281DRAFT_04139 at 250.044 kb on + strand, within H281DRAFT_04139 at 250.045 kb on - strand, within H281DRAFT_04139 at 250.045 kb on - strand, within H281DRAFT_04139 at 250.082 kb on + strand, within H281DRAFT_04139 at 250.082 kb on + strand at 250.083 kb on - strand, within H281DRAFT_04139 at 250.107 kb on + strand, within H281DRAFT_04139 at 250.107 kb on + strand, within H281DRAFT_04139 at 250.108 kb on - strand, within H281DRAFT_04139 at 250.108 kb on - strand, within H281DRAFT_04139 at 250.108 kb on - strand, within H281DRAFT_04139 at 250.256 kb on - strand, within H281DRAFT_04139 at 250.347 kb on + strand, within H281DRAFT_04139 at 250.347 kb on + strand, within H281DRAFT_04139 at 250.348 kb on - strand, within H281DRAFT_04139 at 250.348 kb on - strand, within H281DRAFT_04139 at 250.378 kb on - strand, within H281DRAFT_04139 at 250.416 kb on + strand, within H281DRAFT_04139 at 250.416 kb on + strand, within H281DRAFT_04139 at 250.417 kb on - strand, within H281DRAFT_04139 at 250.513 kb on - strand at 250.534 kb on - strand at 250.540 kb on + strand at 250.541 kb on - strand at 250.663 kb on + strand at 250.664 kb on - strand at 250.871 kb on - strand, within H281DRAFT_04140 at 250.871 kb on - strand, within H281DRAFT_04140 at 250.959 kb on - strand, within H281DRAFT_04140 at 250.995 kb on + strand, within H281DRAFT_04140 at 250.995 kb on + strand, within H281DRAFT_04140 at 250.995 kb on + strand, within H281DRAFT_04140 at 250.996 kb on - strand, within H281DRAFT_04140 at 250.996 kb on - strand, within H281DRAFT_04140 at 250.996 kb on - strand, within H281DRAFT_04140 at 250.996 kb on - strand, within H281DRAFT_04140 at 251.040 kb on + strand, within H281DRAFT_04140 at 251.041 kb on - strand, within H281DRAFT_04140 at 251.088 kb on + strand, within H281DRAFT_04140 at 251.244 kb on - strand at 251.413 kb on - strand, within H281DRAFT_04141 at 251.413 kb on - strand, within H281DRAFT_04141 at 251.413 kb on - strand, within H281DRAFT_04141 at 251.414 kb on + strand, within H281DRAFT_04141 at 251.414 kb on + strand, within H281DRAFT_04141 at 251.414 kb on + strand at 251.414 kb on + strand, within H281DRAFT_04141 at 251.414 kb on + strand, within H281DRAFT_04141 at 251.414 kb on + strand, within H281DRAFT_04141 at 251.414 kb on + strand at 251.477 kb on + strand, within H281DRAFT_04141 at 251.478 kb on - strand, within H281DRAFT_04141 at 251.478 kb on - strand, within H281DRAFT_04141 at 251.802 kb on + strand at 251.835 kb on - strand at 251.896 kb on + strand at 251.896 kb on + strand at 251.897 kb on - strand at 251.897 kb on - strand at 251.897 kb on - strand at 251.897 kb on - strand at 251.907 kb on - strand at 252.106 kb on + strand, within H281DRAFT_04142 at 252.137 kb on + strand, within H281DRAFT_04142 at 252.151 kb on + strand, within H281DRAFT_04142 at 252.152 kb on - strand, within H281DRAFT_04142
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 249,785 - H281DRAFT_04138 0.89 -1.4 250,032 + H281DRAFT_04139 0.18 -0.2 250,044 + H281DRAFT_04139 0.20 +0.1 250,044 + H281DRAFT_04139 0.20 -0.7 250,045 - H281DRAFT_04139 0.21 -3.4 250,045 - H281DRAFT_04139 0.21 +0.1 250,082 + H281DRAFT_04139 0.27 -0.3 250,082 + +0.7 250,083 - H281DRAFT_04139 0.28 -1.1 250,107 + H281DRAFT_04139 0.32 -0.7 250,107 + H281DRAFT_04139 0.32 -0.5 250,108 - H281DRAFT_04139 0.32 +1.0 250,108 - H281DRAFT_04139 0.32 -1.1 250,108 - H281DRAFT_04139 0.32 -0.3 250,256 - H281DRAFT_04139 0.59 -2.1 250,347 + H281DRAFT_04139 0.76 +0.3 250,347 + H281DRAFT_04139 0.76 -0.4 250,348 - H281DRAFT_04139 0.76 +0.2 250,348 - H281DRAFT_04139 0.76 -0.7 250,378 - H281DRAFT_04139 0.81 +0.5 250,416 + H281DRAFT_04139 0.88 +0.2 250,416 + H281DRAFT_04139 0.88 -1.6 250,417 - H281DRAFT_04139 0.88 +0.1 250,513 - +1.2 250,534 - +0.3 250,540 + +1.1 250,541 - -1.9 250,663 + +1.2 250,664 - +0.2 250,871 - H281DRAFT_04140 0.30 -0.1 250,871 - H281DRAFT_04140 0.30 +2.7 250,959 - H281DRAFT_04140 0.46 +0.8 250,995 + H281DRAFT_04140 0.53 +1.0 250,995 + H281DRAFT_04140 0.53 -0.7 250,995 + H281DRAFT_04140 0.53 +0.1 250,996 - H281DRAFT_04140 0.53 +0.3 250,996 - H281DRAFT_04140 0.53 -0.7 250,996 - H281DRAFT_04140 0.53 +1.0 250,996 - H281DRAFT_04140 0.53 +0.4 251,040 + H281DRAFT_04140 0.61 +0.2 251,041 - H281DRAFT_04140 0.62 +0.8 251,088 + H281DRAFT_04140 0.70 -1.2 251,244 - -0.2 251,413 - H281DRAFT_04141 0.24 +0.2 251,413 - H281DRAFT_04141 0.24 +0.6 251,413 - H281DRAFT_04141 0.24 +0.4 251,414 + H281DRAFT_04141 0.25 +0.4 251,414 + H281DRAFT_04141 0.25 +0.9 251,414 + +1.1 251,414 + H281DRAFT_04141 0.25 +1.0 251,414 + H281DRAFT_04141 0.25 +1.0 251,414 + H281DRAFT_04141 0.25 +0.4 251,414 + +2.7 251,477 + H281DRAFT_04141 0.37 +0.2 251,478 - H281DRAFT_04141 0.37 +1.3 251,478 - H281DRAFT_04141 0.37 +0.0 251,802 + -0.3 251,835 - -0.7 251,896 + +1.1 251,896 + +0.3 251,897 - +0.2 251,897 - -1.1 251,897 - -0.4 251,897 - +0.8 251,907 - -0.1 252,106 + H281DRAFT_04142 0.27 +0.8 252,137 + H281DRAFT_04142 0.32 +0.4 252,151 + H281DRAFT_04142 0.34 -0.3 252,152 - H281DRAFT_04142 0.34 +0.5
Or see this region's nucleotide sequence