Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04064 and H281DRAFT_04065 are separated by 2 nucleotides H281DRAFT_04065 and H281DRAFT_04066 are separated by 66 nucleotides H281DRAFT_04066 and H281DRAFT_04067 are separated by 278 nucleotides H281DRAFT_04067 and H281DRAFT_04068 are separated by 10 nucleotides H281DRAFT_04068 and H281DRAFT_04069 are separated by 241 nucleotides
H281DRAFT_04064: H281DRAFT_04064 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 166,099 to 167,058
_04064
H281DRAFT_04065: H281DRAFT_04065 - FKBP-type peptidyl-prolyl cis-trans isomerase SlpA, at 167,061 to 167,627
_04065
H281DRAFT_04066: H281DRAFT_04066 - DNA replication and repair protein RadC, at 167,694 to 168,458
_04066
H281DRAFT_04067: H281DRAFT_04067 - LSU ribosomal protein L28P, at 168,737 to 168,970
_04067
H281DRAFT_04068: H281DRAFT_04068 - LSU ribosomal protein L33P, at 168,981 to 169,148
_04068
H281DRAFT_04069: H281DRAFT_04069 - L-aspartate oxidase, at 169,390 to 170,988
_04069
Position (kb) 167
168
169 Strain fitness (log2 ratio) -2
-1
0
1
2 at 166.905 kb on + strand, within H281DRAFT_04064 at 167.063 kb on - strand at 167.618 kb on + strand at 167.618 kb on + strand at 167.618 kb on + strand at 167.618 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.691 kb on + strand at 167.692 kb on - strand at 167.692 kb on - strand at 167.692 kb on - strand at 167.692 kb on - strand at 167.692 kb on - strand at 167.692 kb on - strand at 167.692 kb on - strand at 167.693 kb on + strand at 167.693 kb on + strand at 167.693 kb on + strand at 167.693 kb on + strand at 167.694 kb on - strand at 167.694 kb on - strand at 167.694 kb on - strand at 167.704 kb on - strand at 167.704 kb on - strand at 167.704 kb on - strand at 167.704 kb on - strand at 167.851 kb on + strand, within H281DRAFT_04066 at 167.852 kb on - strand, within H281DRAFT_04066 at 167.852 kb on - strand, within H281DRAFT_04066 at 167.852 kb on - strand, within H281DRAFT_04066 at 167.881 kb on + strand, within H281DRAFT_04066 at 167.976 kb on + strand, within H281DRAFT_04066 at 167.976 kb on + strand, within H281DRAFT_04066 at 167.977 kb on - strand, within H281DRAFT_04066 at 167.977 kb on - strand, within H281DRAFT_04066 at 168.230 kb on + strand, within H281DRAFT_04066 at 168.241 kb on - strand, within H281DRAFT_04066 at 168.302 kb on + strand, within H281DRAFT_04066 at 168.302 kb on + strand, within H281DRAFT_04066 at 168.303 kb on - strand, within H281DRAFT_04066 at 168.410 kb on - strand at 168.428 kb on - strand at 168.428 kb on - strand at 168.428 kb on - strand at 168.429 kb on + strand at 168.429 kb on + strand at 168.429 kb on + strand at 168.483 kb on + strand at 168.483 kb on + strand at 168.483 kb on + strand at 169.142 kb on + strand at 169.269 kb on + strand at 169.269 kb on + strand at 169.269 kb on + strand at 169.270 kb on - strand at 169.273 kb on + strand at 169.273 kb on + strand at 169.273 kb on + strand at 169.273 kb on + strand at 169.274 kb on - strand at 169.274 kb on - strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.279 kb on + strand at 169.280 kb on - strand at 169.280 kb on - strand at 169.280 kb on - strand at 169.280 kb on - strand at 169.280 kb on - strand at 169.280 kb on - strand at 169.282 kb on - strand at 169.282 kb on - strand at 169.282 kb on - strand at 169.334 kb on + strand at 169.335 kb on - strand at 169.359 kb on + strand at 169.359 kb on + strand at 169.359 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 166,905 + H281DRAFT_04064 0.84 +0.6 167,063 - -1.3 167,618 + +0.4 167,618 + +0.9 167,618 + +0.7 167,618 + +1.3 167,691 + +1.6 167,691 + +0.6 167,691 + +0.0 167,691 + +1.2 167,691 + +0.4 167,691 + -0.4 167,691 + -0.8 167,691 + +0.2 167,691 + -0.2 167,691 + -1.6 167,692 - -0.4 167,692 - +0.4 167,692 - +1.5 167,692 - +0.0 167,692 - +1.1 167,692 - +1.0 167,692 - +0.3 167,693 + -1.2 167,693 + +0.5 167,693 + -0.3 167,693 + -1.0 167,694 - +0.9 167,694 - +1.8 167,694 - +0.7 167,704 - +0.9 167,704 - +1.5 167,704 - +0.7 167,704 - +1.2 167,851 + H281DRAFT_04066 0.21 -0.3 167,852 - H281DRAFT_04066 0.21 +0.2 167,852 - H281DRAFT_04066 0.21 -0.2 167,852 - H281DRAFT_04066 0.21 +0.0 167,881 + H281DRAFT_04066 0.24 +0.4 167,976 + H281DRAFT_04066 0.37 -2.3 167,976 + H281DRAFT_04066 0.37 +0.4 167,977 - H281DRAFT_04066 0.37 +0.6 167,977 - H281DRAFT_04066 0.37 +1.3 168,230 + H281DRAFT_04066 0.70 -0.9 168,241 - H281DRAFT_04066 0.72 -0.4 168,302 + H281DRAFT_04066 0.79 +0.4 168,302 + H281DRAFT_04066 0.79 -0.9 168,303 - H281DRAFT_04066 0.80 -1.0 168,410 - +0.4 168,428 - +0.8 168,428 - +0.8 168,428 - +0.4 168,429 + -1.2 168,429 + -0.8 168,429 + +0.1 168,483 + +0.7 168,483 + +0.4 168,483 + +0.8 169,142 + +0.6 169,269 + -0.3 169,269 + +0.2 169,269 + -0.1 169,270 - +0.2 169,273 + +0.2 169,273 + -0.3 169,273 + +0.2 169,273 + -0.5 169,274 - -1.9 169,274 - +0.0 169,279 + +0.2 169,279 + -0.9 169,279 + +1.7 169,279 + -0.3 169,279 + +1.6 169,279 + +0.3 169,279 + -1.8 169,279 + -0.0 169,279 + -0.4 169,279 + +0.5 169,280 - -0.6 169,280 - -0.3 169,280 - +0.2 169,280 - +2.1 169,280 - -0.4 169,280 - -2.3 169,282 - +1.0 169,282 - -0.6 169,282 - +0.6 169,334 + +0.2 169,335 - -0.5 169,359 + -1.3 169,359 + -0.3 169,359 + +0.7
Or see this region's nucleotide sequence