Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04061 and H281DRAFT_04062 are separated by 22 nucleotides H281DRAFT_04062 and H281DRAFT_04063 are separated by 229 nucleotides
H281DRAFT_04061: H281DRAFT_04061 - amino acid/amide ABC transporter membrane protein 2, HAAT family, at 161,989 to 163,158
_04061
H281DRAFT_04062: H281DRAFT_04062 - amino acid/amide ABC transporter membrane protein 1, HAAT family, at 163,181 to 164,131
_04062
H281DRAFT_04063: H281DRAFT_04063 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 164,361 to 165,563
_04063
Position (kb) 163
164
165 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 162.399 kb on + strand, within H281DRAFT_04061 at 162.530 kb on + strand, within H281DRAFT_04061 at 162.531 kb on - strand, within H281DRAFT_04061 at 162.533 kb on + strand, within H281DRAFT_04061 at 162.533 kb on + strand, within H281DRAFT_04061 at 162.534 kb on - strand, within H281DRAFT_04061 at 162.536 kb on + strand, within H281DRAFT_04061 at 162.536 kb on + strand, within H281DRAFT_04061 at 162.536 kb on + strand, within H281DRAFT_04061 at 162.537 kb on - strand, within H281DRAFT_04061 at 162.537 kb on - strand, within H281DRAFT_04061 at 162.542 kb on + strand, within H281DRAFT_04061 at 162.543 kb on - strand, within H281DRAFT_04061 at 162.722 kb on + strand, within H281DRAFT_04061 at 162.722 kb on + strand, within H281DRAFT_04061 at 162.757 kb on + strand, within H281DRAFT_04061 at 162.895 kb on - strand, within H281DRAFT_04061 at 162.921 kb on + strand, within H281DRAFT_04061 at 162.922 kb on - strand, within H281DRAFT_04061 at 162.922 kb on - strand, within H281DRAFT_04061 at 162.923 kb on + strand, within H281DRAFT_04061 at 162.924 kb on - strand, within H281DRAFT_04061 at 162.987 kb on - strand, within H281DRAFT_04061 at 162.987 kb on - strand, within H281DRAFT_04061 at 162.987 kb on - strand, within H281DRAFT_04061 at 163.019 kb on + strand, within H281DRAFT_04061 at 163.019 kb on + strand, within H281DRAFT_04061 at 163.020 kb on - strand, within H281DRAFT_04061 at 163.020 kb on - strand, within H281DRAFT_04061 at 163.273 kb on - strand at 163.276 kb on + strand, within H281DRAFT_04062 at 163.310 kb on - strand, within H281DRAFT_04062 at 163.434 kb on + strand, within H281DRAFT_04062 at 163.435 kb on - strand, within H281DRAFT_04062 at 163.875 kb on + strand, within H281DRAFT_04062 at 163.970 kb on + strand, within H281DRAFT_04062 at 163.971 kb on - strand, within H281DRAFT_04062 at 164.046 kb on + strand at 164.056 kb on + strand at 164.056 kb on + strand at 164.056 kb on + strand at 164.057 kb on - strand at 164.057 kb on - strand at 164.057 kb on - strand at 164.057 kb on - strand at 164.079 kb on + strand at 164.079 kb on + strand at 164.079 kb on + strand at 164.080 kb on - strand at 164.106 kb on - strand at 164.125 kb on + strand at 164.125 kb on + strand at 164.126 kb on - strand at 164.133 kb on + strand at 164.134 kb on - strand at 164.134 kb on - strand at 164.143 kb on + strand at 164.229 kb on + strand at 164.229 kb on + strand at 164.363 kb on - strand at 164.363 kb on - strand at 164.410 kb on + strand at 164.411 kb on - strand at 164.411 kb on - strand at 164.411 kb on - strand at 164.411 kb on - strand at 164.417 kb on + strand at 164.480 kb on - strand at 164.480 kb on - strand at 164.557 kb on + strand, within H281DRAFT_04063 at 164.557 kb on + strand, within H281DRAFT_04063 at 164.558 kb on - strand, within H281DRAFT_04063 at 164.569 kb on + strand, within H281DRAFT_04063 at 164.569 kb on + strand, within H281DRAFT_04063 at 164.570 kb on - strand, within H281DRAFT_04063 at 164.570 kb on - strand, within H281DRAFT_04063 at 164.570 kb on - strand, within H281DRAFT_04063 at 164.584 kb on + strand, within H281DRAFT_04063 at 164.584 kb on + strand, within H281DRAFT_04063 at 164.585 kb on - strand, within H281DRAFT_04063 at 164.585 kb on - strand, within H281DRAFT_04063 at 164.617 kb on + strand, within H281DRAFT_04063 at 164.617 kb on + strand, within H281DRAFT_04063 at 164.617 kb on + strand, within H281DRAFT_04063 at 164.618 kb on - strand, within H281DRAFT_04063 at 164.618 kb on - strand, within H281DRAFT_04063 at 164.727 kb on - strand, within H281DRAFT_04063 at 165.071 kb on - strand, within H281DRAFT_04063
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 162,399 + H281DRAFT_04061 0.35 +0.2 162,530 + H281DRAFT_04061 0.46 +1.4 162,531 - H281DRAFT_04061 0.46 +0.3 162,533 + H281DRAFT_04061 0.46 -0.7 162,533 + H281DRAFT_04061 0.46 +0.4 162,534 - H281DRAFT_04061 0.47 -1.1 162,536 + H281DRAFT_04061 0.47 -1.0 162,536 + H281DRAFT_04061 0.47 +0.1 162,536 + H281DRAFT_04061 0.47 +0.2 162,537 - H281DRAFT_04061 0.47 -0.5 162,537 - H281DRAFT_04061 0.47 -1.4 162,542 + H281DRAFT_04061 0.47 +0.3 162,543 - H281DRAFT_04061 0.47 -0.7 162,722 + H281DRAFT_04061 0.63 -0.1 162,722 + H281DRAFT_04061 0.63 -1.9 162,757 + H281DRAFT_04061 0.66 -0.7 162,895 - H281DRAFT_04061 0.77 -0.3 162,921 + H281DRAFT_04061 0.80 -0.2 162,922 - H281DRAFT_04061 0.80 -0.3 162,922 - H281DRAFT_04061 0.80 -0.8 162,923 + H281DRAFT_04061 0.80 -0.6 162,924 - H281DRAFT_04061 0.80 -0.7 162,987 - H281DRAFT_04061 0.85 -0.7 162,987 - H281DRAFT_04061 0.85 -0.6 162,987 - H281DRAFT_04061 0.85 -0.5 163,019 + H281DRAFT_04061 0.88 +0.7 163,019 + H281DRAFT_04061 0.88 -0.9 163,020 - H281DRAFT_04061 0.88 -0.6 163,020 - H281DRAFT_04061 0.88 -0.6 163,273 - -0.0 163,276 + H281DRAFT_04062 0.10 +1.1 163,310 - H281DRAFT_04062 0.14 -0.9 163,434 + H281DRAFT_04062 0.27 +0.0 163,435 - H281DRAFT_04062 0.27 -0.4 163,875 + H281DRAFT_04062 0.73 -1.1 163,970 + H281DRAFT_04062 0.83 +3.9 163,971 - H281DRAFT_04062 0.83 -0.3 164,046 + -1.3 164,056 + -0.8 164,056 + -0.6 164,056 + -0.7 164,057 - +3.0 164,057 - -1.3 164,057 - -1.1 164,057 - -0.1 164,079 + -0.6 164,079 + -1.7 164,079 + +0.2 164,080 - +0.5 164,106 - +0.2 164,125 + +0.3 164,125 + -0.6 164,126 - +0.0 164,133 + +0.7 164,134 - +1.0 164,134 - +0.0 164,143 + -0.3 164,229 + -0.6 164,229 + +0.5 164,363 - +0.7 164,363 - -0.1 164,410 + +1.1 164,411 - -0.7 164,411 - -0.2 164,411 - +0.7 164,411 - +1.0 164,417 + +0.0 164,480 - +0.1 164,480 - +0.2 164,557 + H281DRAFT_04063 0.16 +0.5 164,557 + H281DRAFT_04063 0.16 -1.4 164,558 - H281DRAFT_04063 0.16 +0.8 164,569 + H281DRAFT_04063 0.17 +0.4 164,569 + H281DRAFT_04063 0.17 -1.1 164,570 - H281DRAFT_04063 0.17 -0.3 164,570 - H281DRAFT_04063 0.17 -0.6 164,570 - H281DRAFT_04063 0.17 +0.2 164,584 + H281DRAFT_04063 0.19 -0.5 164,584 + H281DRAFT_04063 0.19 -0.7 164,585 - H281DRAFT_04063 0.19 +1.1 164,585 - H281DRAFT_04063 0.19 -0.2 164,617 + H281DRAFT_04063 0.21 +0.3 164,617 + H281DRAFT_04063 0.21 +0.1 164,617 + H281DRAFT_04063 0.21 -0.3 164,618 - H281DRAFT_04063 0.21 -0.5 164,618 - H281DRAFT_04063 0.21 +0.0 164,727 - H281DRAFT_04063 0.30 +0.8 165,071 - H281DRAFT_04063 0.59 -1.6
Or see this region's nucleotide sequence