Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04052 and H281DRAFT_04053 are separated by 2 nucleotides H281DRAFT_04053 and H281DRAFT_04054 are separated by 166 nucleotides H281DRAFT_04054 and H281DRAFT_04055 are separated by 140 nucleotides
H281DRAFT_04052: H281DRAFT_04052 - Predicted arabinose efflux permease, MFS family, at 153,513 to 154,763
_04052
H281DRAFT_04053: H281DRAFT_04053 - ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-), at 154,766 to 155,566
_04053
H281DRAFT_04054: H281DRAFT_04054 - hypothetical protein, at 155,733 to 155,921
_04054
H281DRAFT_04055: H281DRAFT_04055 - Nucleoside-diphosphate-sugar epimerase, at 156,062 to 157,129
_04055
Position (kb)
155
156 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 154.841 kb on + strand at 154.841 kb on + strand at 155.045 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.259 kb on - strand, within H281DRAFT_04053 at 155.259 kb on - strand, within H281DRAFT_04053 at 155.323 kb on - strand, within H281DRAFT_04053 at 155.411 kb on + strand, within H281DRAFT_04053 at 155.600 kb on + strand at 155.601 kb on - strand at 155.691 kb on + strand at 155.691 kb on + strand at 155.692 kb on - strand at 155.711 kb on - strand at 155.763 kb on + strand, within H281DRAFT_04054 at 155.841 kb on + strand, within H281DRAFT_04054 at 155.841 kb on + strand, within H281DRAFT_04054 at 155.842 kb on - strand, within H281DRAFT_04054 at 155.939 kb on + strand at 155.939 kb on + strand at 155.940 kb on - strand at 155.940 kb on - strand at 156.033 kb on + strand at 156.034 kb on - strand at 156.034 kb on - strand at 156.046 kb on + strand at 156.046 kb on + strand at 156.046 kb on + strand at 156.047 kb on - strand at 156.140 kb on + strand at 156.146 kb on + strand at 156.146 kb on + strand at 156.147 kb on - strand at 156.292 kb on - strand, within H281DRAFT_04055 at 156.292 kb on - strand, within H281DRAFT_04055 at 156.292 kb on - strand, within H281DRAFT_04055 at 156.480 kb on + strand, within H281DRAFT_04055 at 156.480 kb on + strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.634 kb on - strand, within H281DRAFT_04055 at 156.707 kb on + strand, within H281DRAFT_04055 at 156.713 kb on - strand, within H281DRAFT_04055
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 154,841 + +2.1 154,841 + +2.1 155,045 + H281DRAFT_04053 0.35 +0.2 155,258 + H281DRAFT_04053 0.61 -0.3 155,258 + H281DRAFT_04053 0.61 +0.8 155,258 + H281DRAFT_04053 0.61 -0.4 155,259 - H281DRAFT_04053 0.62 -0.2 155,259 - H281DRAFT_04053 0.62 +0.2 155,323 - H281DRAFT_04053 0.70 -0.4 155,411 + H281DRAFT_04053 0.81 +0.7 155,600 + -1.3 155,601 - +0.4 155,691 + +0.6 155,691 + +0.4 155,692 - -0.3 155,711 - -0.6 155,763 + H281DRAFT_04054 0.16 -0.1 155,841 + H281DRAFT_04054 0.57 -2.9 155,841 + H281DRAFT_04054 0.57 -0.9 155,842 - H281DRAFT_04054 0.58 -0.0 155,939 + +1.0 155,939 + -2.4 155,940 - +0.4 155,940 - +0.8 156,033 + +0.0 156,034 - +0.2 156,034 - -0.0 156,046 + -0.2 156,046 + +2.9 156,046 + +0.6 156,047 - -0.2 156,140 + -0.8 156,146 + -1.2 156,146 + +1.4 156,147 - -0.8 156,292 - H281DRAFT_04055 0.22 -1.9 156,292 - H281DRAFT_04055 0.22 -0.9 156,292 - H281DRAFT_04055 0.22 +0.5 156,480 + H281DRAFT_04055 0.39 -0.2 156,480 + H281DRAFT_04055 0.39 -0.9 156,481 - H281DRAFT_04055 0.39 -0.8 156,481 - H281DRAFT_04055 0.39 +0.4 156,481 - H281DRAFT_04055 0.39 -0.4 156,634 - H281DRAFT_04055 0.54 -0.9 156,707 + H281DRAFT_04055 0.60 -0.2 156,713 - H281DRAFT_04055 0.61 +0.0
Or see this region's nucleotide sequence