Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03995 and H281DRAFT_03996 are separated by 278 nucleotides H281DRAFT_03996 and H281DRAFT_03997 are separated by 106 nucleotides H281DRAFT_03997 and H281DRAFT_03998 are separated by 546 nucleotides
H281DRAFT_03995: H281DRAFT_03995 - hypothetical protein, at 100,202 to 100,351
_03995
H281DRAFT_03996: H281DRAFT_03996 - chorismate mutase (EC 5.4.99.5), at 100,630 to 101,226
_03996
H281DRAFT_03997: H281DRAFT_03997 - DNA polymerase-3 subunit epsilon, at 101,333 to 102,484
_03997
H281DRAFT_03998: H281DRAFT_03998 - hypothetical protein, at 103,031 to 103,279
_03998
Position (kb) 101
102
103 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 100.349 kb on + strand at 100.349 kb on + strand at 100.390 kb on - strand at 100.390 kb on - strand at 100.583 kb on + strand at 100.583 kb on + strand at 100.584 kb on - strand at 100.803 kb on + strand, within H281DRAFT_03996 at 101.136 kb on + strand, within H281DRAFT_03996 at 101.137 kb on - strand, within H281DRAFT_03996 at 101.192 kb on + strand at 101.192 kb on + strand at 101.192 kb on + strand at 101.192 kb on + strand at 101.192 kb on + strand at 101.193 kb on - strand at 101.193 kb on - strand at 101.193 kb on - strand at 101.193 kb on - strand at 101.305 kb on + strand at 101.306 kb on - strand at 101.345 kb on + strand at 101.421 kb on + strand at 101.421 kb on + strand at 101.502 kb on + strand, within H281DRAFT_03997 at 101.502 kb on + strand, within H281DRAFT_03997 at 101.502 kb on + strand, within H281DRAFT_03997 at 101.502 kb on + strand, within H281DRAFT_03997 at 101.503 kb on - strand, within H281DRAFT_03997 at 101.503 kb on - strand, within H281DRAFT_03997 at 101.503 kb on - strand, within H281DRAFT_03997 at 101.503 kb on - strand, within H281DRAFT_03997 at 101.503 kb on - strand, within H281DRAFT_03997 at 101.711 kb on + strand, within H281DRAFT_03997 at 101.711 kb on + strand, within H281DRAFT_03997 at 101.737 kb on + strand, within H281DRAFT_03997 at 101.738 kb on + strand, within H281DRAFT_03997 at 101.738 kb on + strand, within H281DRAFT_03997 at 101.739 kb on - strand, within H281DRAFT_03997 at 101.739 kb on - strand, within H281DRAFT_03997 at 101.741 kb on - strand, within H281DRAFT_03997 at 101.741 kb on - strand, within H281DRAFT_03997 at 101.741 kb on - strand, within H281DRAFT_03997 at 101.814 kb on + strand, within H281DRAFT_03997 at 101.815 kb on - strand, within H281DRAFT_03997 at 101.815 kb on - strand, within H281DRAFT_03997 at 101.815 kb on - strand, within H281DRAFT_03997 at 101.815 kb on - strand, within H281DRAFT_03997 at 101.815 kb on - strand, within H281DRAFT_03997 at 101.838 kb on + strand, within H281DRAFT_03997 at 101.838 kb on + strand, within H281DRAFT_03997 at 101.839 kb on - strand, within H281DRAFT_03997 at 101.839 kb on - strand, within H281DRAFT_03997 at 101.839 kb on - strand, within H281DRAFT_03997 at 101.847 kb on + strand, within H281DRAFT_03997 at 101.847 kb on + strand, within H281DRAFT_03997 at 101.933 kb on - strand, within H281DRAFT_03997 at 101.933 kb on - strand, within H281DRAFT_03997 at 101.951 kb on + strand, within H281DRAFT_03997 at 101.952 kb on - strand, within H281DRAFT_03997 at 101.952 kb on - strand, within H281DRAFT_03997 at 102.190 kb on + strand, within H281DRAFT_03997 at 102.365 kb on + strand, within H281DRAFT_03997 at 102.365 kb on + strand, within H281DRAFT_03997 at 102.365 kb on + strand, within H281DRAFT_03997 at 102.391 kb on + strand at 102.391 kb on + strand at 102.391 kb on + strand at 102.391 kb on + strand at 102.392 kb on - strand at 102.392 kb on - strand at 102.392 kb on - strand at 102.392 kb on - strand at 102.392 kb on - strand at 102.520 kb on + strand at 102.520 kb on + strand at 102.520 kb on + strand at 102.520 kb on + strand at 102.520 kb on + strand at 102.520 kb on + strand at 102.520 kb on + strand at 102.521 kb on - strand at 102.521 kb on - strand at 102.521 kb on - strand at 102.521 kb on - strand at 102.521 kb on - strand at 102.521 kb on - strand at 102.521 kb on - strand at 102.527 kb on + strand at 102.527 kb on + strand at 102.528 kb on - strand at 102.528 kb on - strand at 102.528 kb on - strand at 102.528 kb on - strand at 102.528 kb on - strand at 102.531 kb on + strand at 102.531 kb on + strand at 102.548 kb on + strand at 102.548 kb on + strand at 102.548 kb on + strand at 102.549 kb on - strand at 102.549 kb on - strand at 102.549 kb on - strand at 102.643 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.655 kb on - strand at 102.667 kb on + strand at 102.685 kb on + strand at 102.688 kb on + strand at 102.689 kb on - strand at 102.755 kb on + strand at 102.762 kb on + strand at 102.824 kb on - strand at 102.827 kb on + strand at 102.828 kb on - strand at 102.856 kb on + strand at 102.891 kb on + strand at 102.905 kb on + strand at 102.947 kb on + strand at 102.947 kb on + strand at 102.947 kb on + strand at 102.947 kb on + strand at 102.947 kb on + strand at 102.948 kb on - strand at 102.948 kb on - strand at 103.064 kb on - strand, within H281DRAFT_03998 at 103.064 kb on - strand, within H281DRAFT_03998 at 103.064 kb on - strand, within H281DRAFT_03998 at 103.208 kb on + strand, within H281DRAFT_03998 at 103.208 kb on + strand, within H281DRAFT_03998 at 103.208 kb on + strand, within H281DRAFT_03998 at 103.209 kb on - strand, within H281DRAFT_03998 at 103.449 kb on + strand at 103.451 kb on + strand at 103.452 kb on - strand at 103.458 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 100,349 + +0.9 100,349 + -1.7 100,390 - +0.6 100,390 - -0.0 100,583 + +1.2 100,583 + +0.4 100,584 - +0.0 100,803 + H281DRAFT_03996 0.29 +0.3 101,136 + H281DRAFT_03996 0.85 +0.1 101,137 - H281DRAFT_03996 0.85 -2.4 101,192 + +0.4 101,192 + +0.2 101,192 + +1.8 101,192 + +0.2 101,192 + -0.1 101,193 - +0.2 101,193 - -0.6 101,193 - +1.1 101,193 - -0.6 101,305 + -1.3 101,306 - +0.3 101,345 + -0.1 101,421 + -0.2 101,421 + +1.2 101,502 + H281DRAFT_03997 0.15 +0.5 101,502 + H281DRAFT_03997 0.15 -0.0 101,502 + H281DRAFT_03997 0.15 -0.6 101,502 + H281DRAFT_03997 0.15 +1.3 101,503 - H281DRAFT_03997 0.15 +0.3 101,503 - H281DRAFT_03997 0.15 +1.4 101,503 - H281DRAFT_03997 0.15 +1.1 101,503 - H281DRAFT_03997 0.15 +0.3 101,503 - H281DRAFT_03997 0.15 -0.4 101,711 + H281DRAFT_03997 0.33 -0.4 101,711 + H281DRAFT_03997 0.33 +0.3 101,737 + H281DRAFT_03997 0.35 +1.0 101,738 + H281DRAFT_03997 0.35 -0.2 101,738 + H281DRAFT_03997 0.35 +0.5 101,739 - H281DRAFT_03997 0.35 +0.1 101,739 - H281DRAFT_03997 0.35 +1.1 101,741 - H281DRAFT_03997 0.35 +0.8 101,741 - H281DRAFT_03997 0.35 -0.8 101,741 - H281DRAFT_03997 0.35 -0.1 101,814 + H281DRAFT_03997 0.42 +0.1 101,815 - H281DRAFT_03997 0.42 +0.1 101,815 - H281DRAFT_03997 0.42 -1.2 101,815 - H281DRAFT_03997 0.42 +0.3 101,815 - H281DRAFT_03997 0.42 +0.2 101,815 - H281DRAFT_03997 0.42 -0.4 101,838 + H281DRAFT_03997 0.44 +0.4 101,838 + H281DRAFT_03997 0.44 +0.9 101,839 - H281DRAFT_03997 0.44 +0.4 101,839 - H281DRAFT_03997 0.44 -0.7 101,839 - H281DRAFT_03997 0.44 -0.5 101,847 + H281DRAFT_03997 0.45 +0.3 101,847 + H281DRAFT_03997 0.45 +0.3 101,933 - H281DRAFT_03997 0.52 -0.4 101,933 - H281DRAFT_03997 0.52 +0.1 101,951 + H281DRAFT_03997 0.54 -0.2 101,952 - H281DRAFT_03997 0.54 +0.7 101,952 - H281DRAFT_03997 0.54 +1.6 102,190 + H281DRAFT_03997 0.74 -0.2 102,365 + H281DRAFT_03997 0.90 -0.9 102,365 + H281DRAFT_03997 0.90 +1.2 102,365 + H281DRAFT_03997 0.90 +0.6 102,391 + +1.2 102,391 + -1.6 102,391 + +0.8 102,391 + +1.2 102,392 - +1.6 102,392 - -1.7 102,392 - +0.2 102,392 - +1.4 102,392 - +0.6 102,520 + +0.2 102,520 + +1.1 102,520 + -0.0 102,520 + -0.1 102,520 + -1.0 102,520 + +0.4 102,520 + -0.2 102,521 - -4.3 102,521 - -0.3 102,521 - -1.1 102,521 - -0.1 102,521 - +0.1 102,521 - -1.2 102,521 - -0.4 102,527 + -0.9 102,527 + -0.0 102,528 - +1.5 102,528 - -0.1 102,528 - -0.6 102,528 - +0.4 102,528 - -0.4 102,531 + +0.6 102,531 + -0.7 102,548 + +0.4 102,548 + +0.5 102,548 + +0.7 102,549 - +1.0 102,549 - +0.4 102,549 - +0.4 102,643 + -0.6 102,652 + -0.0 102,652 + +0.4 102,652 + -1.3 102,653 - -0.6 102,653 - +0.1 102,653 - +0.1 102,653 - -0.3 102,653 - -0.6 102,655 - +0.2 102,667 + -0.7 102,685 + +1.1 102,688 + +0.5 102,689 - -0.5 102,755 + +1.0 102,762 + +0.2 102,824 - +0.3 102,827 + -0.3 102,828 - +1.6 102,856 + +0.3 102,891 + -1.4 102,905 + +0.0 102,947 + -0.4 102,947 + -0.3 102,947 + -0.7 102,947 + +2.1 102,947 + -1.1 102,948 - -0.7 102,948 - +0.7 103,064 - H281DRAFT_03998 0.13 -0.4 103,064 - H281DRAFT_03998 0.13 -0.1 103,064 - H281DRAFT_03998 0.13 +0.2 103,208 + H281DRAFT_03998 0.71 +0.9 103,208 + H281DRAFT_03998 0.71 +0.3 103,208 + H281DRAFT_03998 0.71 +1.1 103,209 - H281DRAFT_03998 0.71 -0.1 103,449 + +0.2 103,451 + -1.3 103,452 - +0.3 103,458 + +0.5
Or see this region's nucleotide sequence