Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03986 and H281DRAFT_03987 are separated by 80 nucleotides H281DRAFT_03987 and H281DRAFT_03988 are separated by 187 nucleotides
H281DRAFT_03986: H281DRAFT_03986 - Putative Ca2+/H+ antiporter, TMEM165/GDT1 family, at 92,608 to 93,225
_03986
H281DRAFT_03987: H281DRAFT_03987 - protein of unknown function (DUF4136), at 93,306 to 94,016
_03987
H281DRAFT_03988: H281DRAFT_03988 - alanyl aminopeptidase. Metallo peptidase. MEROPS family M01, at 94,204 to 96,978
_03988
Position (kb) 93
94
95 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 92.360 kb on + strand at 92.419 kb on + strand at 92.420 kb on - strand at 92.420 kb on - strand at 92.766 kb on + strand, within H281DRAFT_03986 at 92.875 kb on - strand, within H281DRAFT_03986 at 92.922 kb on - strand, within H281DRAFT_03986 at 93.425 kb on + strand, within H281DRAFT_03987 at 93.478 kb on + strand, within H281DRAFT_03987 at 93.478 kb on + strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.536 kb on - strand, within H281DRAFT_03987 at 93.653 kb on - strand, within H281DRAFT_03987 at 93.694 kb on + strand, within H281DRAFT_03987 at 93.694 kb on + strand, within H281DRAFT_03987 at 93.694 kb on + strand, within H281DRAFT_03987 at 93.695 kb on - strand, within H281DRAFT_03987 at 93.695 kb on - strand, within H281DRAFT_03987 at 93.695 kb on - strand, within H281DRAFT_03987 at 93.697 kb on + strand, within H281DRAFT_03987 at 93.697 kb on + strand, within H281DRAFT_03987 at 93.698 kb on - strand, within H281DRAFT_03987 at 93.698 kb on - strand, within H281DRAFT_03987 at 93.739 kb on + strand, within H281DRAFT_03987 at 93.757 kb on + strand, within H281DRAFT_03987 at 93.757 kb on + strand, within H281DRAFT_03987 at 93.826 kb on + strand, within H281DRAFT_03987 at 93.827 kb on - strand, within H281DRAFT_03987 at 93.827 kb on - strand, within H281DRAFT_03987 at 93.827 kb on - strand, within H281DRAFT_03987 at 93.937 kb on + strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 94.055 kb on + strand at 94.055 kb on + strand at 94.056 kb on - strand at 94.056 kb on - strand at 94.061 kb on - strand at 94.064 kb on + strand at 94.064 kb on + strand at 94.110 kb on + strand at 94.110 kb on + strand at 94.110 kb on + strand at 94.111 kb on - strand at 94.200 kb on + strand at 94.201 kb on - strand at 94.201 kb on - strand at 94.316 kb on - strand at 94.446 kb on - strand at 94.610 kb on + strand, within H281DRAFT_03988 at 94.612 kb on + strand, within H281DRAFT_03988 at 94.612 kb on + strand, within H281DRAFT_03988 at 94.613 kb on - strand, within H281DRAFT_03988 at 94.672 kb on + strand, within H281DRAFT_03988 at 94.672 kb on + strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.837 kb on + strand, within H281DRAFT_03988 at 94.838 kb on - strand, within H281DRAFT_03988 at 94.922 kb on + strand, within H281DRAFT_03988
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 92,360 + +0.1 92,419 + +0.1 92,420 - -1.5 92,420 - -1.0 92,766 + H281DRAFT_03986 0.26 +0.4 92,875 - H281DRAFT_03986 0.43 -1.4 92,922 - H281DRAFT_03986 0.51 -0.5 93,425 + H281DRAFT_03987 0.17 +0.3 93,478 + H281DRAFT_03987 0.24 +0.1 93,478 + H281DRAFT_03987 0.24 -0.2 93,479 - H281DRAFT_03987 0.24 -0.3 93,479 - H281DRAFT_03987 0.24 +2.4 93,479 - H281DRAFT_03987 0.24 +0.0 93,479 - H281DRAFT_03987 0.24 +0.3 93,536 - H281DRAFT_03987 0.32 +1.4 93,653 - H281DRAFT_03987 0.49 -1.3 93,694 + H281DRAFT_03987 0.55 +0.1 93,694 + H281DRAFT_03987 0.55 +0.7 93,694 + H281DRAFT_03987 0.55 +0.3 93,695 - H281DRAFT_03987 0.55 -0.4 93,695 - H281DRAFT_03987 0.55 +3.2 93,695 - H281DRAFT_03987 0.55 -0.8 93,697 + H281DRAFT_03987 0.55 +0.1 93,697 + H281DRAFT_03987 0.55 +0.2 93,698 - H281DRAFT_03987 0.55 +0.0 93,698 - H281DRAFT_03987 0.55 -0.8 93,739 + H281DRAFT_03987 0.61 -0.4 93,757 + H281DRAFT_03987 0.63 +0.4 93,757 + H281DRAFT_03987 0.63 +0.7 93,826 + H281DRAFT_03987 0.73 +0.6 93,827 - H281DRAFT_03987 0.73 +0.4 93,827 - H281DRAFT_03987 0.73 +0.6 93,827 - H281DRAFT_03987 0.73 -0.6 93,937 + H281DRAFT_03987 0.89 -0.4 93,938 - H281DRAFT_03987 0.89 +0.1 93,938 - H281DRAFT_03987 0.89 -1.6 93,938 - H281DRAFT_03987 0.89 +1.4 93,938 - H281DRAFT_03987 0.89 +0.1 93,938 - H281DRAFT_03987 0.89 -0.0 94,055 + +0.6 94,055 + -0.2 94,056 - +0.1 94,056 - +1.6 94,061 - +0.4 94,064 + +0.1 94,064 + -0.9 94,110 + +0.3 94,110 + +0.3 94,110 + +0.2 94,111 - -0.5 94,200 + +1.2 94,201 - -0.2 94,201 - -0.6 94,316 - +0.3 94,446 - -0.0 94,610 + H281DRAFT_03988 0.15 +0.6 94,612 + H281DRAFT_03988 0.15 -0.5 94,612 + H281DRAFT_03988 0.15 -1.2 94,613 - H281DRAFT_03988 0.15 -0.6 94,672 + H281DRAFT_03988 0.17 +2.6 94,672 + H281DRAFT_03988 0.17 -0.3 94,673 - H281DRAFT_03988 0.17 -1.5 94,673 - H281DRAFT_03988 0.17 -0.1 94,673 - H281DRAFT_03988 0.17 -0.6 94,673 - H281DRAFT_03988 0.17 -0.3 94,705 + H281DRAFT_03988 0.18 -0.2 94,705 + H281DRAFT_03988 0.18 +0.6 94,705 + H281DRAFT_03988 0.18 -2.2 94,705 + H281DRAFT_03988 0.18 -1.0 94,837 + H281DRAFT_03988 0.23 -0.6 94,838 - H281DRAFT_03988 0.23 -0.2 94,922 + H281DRAFT_03988 0.26 -0.4
Or see this region's nucleotide sequence