Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03955 and H281DRAFT_03956 are separated by 169 nucleotides H281DRAFT_03956 and H281DRAFT_03957 are separated by 22 nucleotides H281DRAFT_03957 and H281DRAFT_03958 are separated by 159 nucleotides H281DRAFT_03958 and H281DRAFT_03959 are separated by 62 nucleotides
H281DRAFT_03955: H281DRAFT_03955 - transporter, CPA2 family, at 57,316 to 59,073
_03955
H281DRAFT_03956: H281DRAFT_03956 - Protein of unknown function (DUF2848), at 59,243 to 59,929
_03956
H281DRAFT_03957: H281DRAFT_03957 - D-galactonate transporter, at 59,952 to 61,301
_03957
H281DRAFT_03958: H281DRAFT_03958 - DNA-binding transcriptional regulator, GntR family, at 61,461 to 62,141
_03958
H281DRAFT_03959: H281DRAFT_03959 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 62,204 to 63,583
_03959
Position (kb) 59
60
61
62 Strain fitness (log2 ratio) -2
-1
0
1 at 58.967 kb on + strand at 58.967 kb on + strand at 58.968 kb on - strand at 59.096 kb on - strand at 59.118 kb on - strand at 59.269 kb on - strand at 59.307 kb on + strand at 59.308 kb on - strand at 59.420 kb on + strand, within H281DRAFT_03956 at 59.421 kb on - strand, within H281DRAFT_03956 at 59.679 kb on - strand, within H281DRAFT_03956 at 59.913 kb on + strand at 59.914 kb on - strand at 59.933 kb on - strand at 60.061 kb on - strand at 60.061 kb on - strand at 60.096 kb on + strand, within H281DRAFT_03957 at 60.177 kb on + strand, within H281DRAFT_03957 at 60.185 kb on - strand, within H281DRAFT_03957 at 60.310 kb on - strand, within H281DRAFT_03957 at 60.310 kb on - strand, within H281DRAFT_03957 at 60.369 kb on + strand, within H281DRAFT_03957 at 60.369 kb on + strand, within H281DRAFT_03957 at 60.370 kb on - strand, within H281DRAFT_03957 at 60.370 kb on - strand, within H281DRAFT_03957 at 60.632 kb on - strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.741 kb on + strand, within H281DRAFT_03957 at 60.741 kb on + strand, within H281DRAFT_03957 at 60.741 kb on + strand, within H281DRAFT_03957 at 60.742 kb on - strand, within H281DRAFT_03957 at 60.924 kb on + strand, within H281DRAFT_03957 at 61.020 kb on + strand, within H281DRAFT_03957 at 61.020 kb on + strand, within H281DRAFT_03957 at 61.020 kb on + strand, within H281DRAFT_03957 at 61.021 kb on - strand, within H281DRAFT_03957 at 61.021 kb on - strand, within H281DRAFT_03957 at 61.137 kb on + strand, within H281DRAFT_03957 at 61.150 kb on - strand, within H281DRAFT_03957 at 61.153 kb on + strand, within H281DRAFT_03957 at 61.153 kb on + strand, within H281DRAFT_03957 at 61.305 kb on - strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.812 kb on + strand, within H281DRAFT_03958 at 61.813 kb on - strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 62.102 kb on + strand at 62.152 kb on + strand at 62.152 kb on + strand at 62.162 kb on - strand at 62.165 kb on + strand at 62.165 kb on + strand at 62.166 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 58,967 + -0.0 58,967 + -0.9 58,968 - +0.6 59,096 - -0.0 59,118 - +0.1 59,269 - -0.3 59,307 + +0.6 59,308 - +1.3 59,420 + H281DRAFT_03956 0.26 +0.1 59,421 - H281DRAFT_03956 0.26 +0.6 59,679 - H281DRAFT_03956 0.63 -0.1 59,913 + -1.0 59,914 - +0.1 59,933 - -0.0 60,061 - -0.0 60,061 - +0.8 60,096 + H281DRAFT_03957 0.11 +1.3 60,177 + H281DRAFT_03957 0.17 -0.4 60,185 - H281DRAFT_03957 0.17 -0.7 60,310 - H281DRAFT_03957 0.27 -0.8 60,310 - H281DRAFT_03957 0.27 +0.2 60,369 + H281DRAFT_03957 0.31 +1.0 60,369 + H281DRAFT_03957 0.31 -0.4 60,370 - H281DRAFT_03957 0.31 -0.1 60,370 - H281DRAFT_03957 0.31 +0.5 60,632 - H281DRAFT_03957 0.50 +1.4 60,689 + H281DRAFT_03957 0.55 +0.2 60,689 + H281DRAFT_03957 0.55 -0.5 60,689 + H281DRAFT_03957 0.55 -1.7 60,689 + H281DRAFT_03957 0.55 -0.5 60,741 + H281DRAFT_03957 0.58 +0.4 60,741 + H281DRAFT_03957 0.58 +0.1 60,741 + H281DRAFT_03957 0.58 -0.7 60,742 - H281DRAFT_03957 0.59 +0.2 60,924 + H281DRAFT_03957 0.72 -0.5 61,020 + H281DRAFT_03957 0.79 +0.3 61,020 + H281DRAFT_03957 0.79 +0.4 61,020 + H281DRAFT_03957 0.79 -0.3 61,021 - H281DRAFT_03957 0.79 +0.2 61,021 - H281DRAFT_03957 0.79 -1.0 61,137 + H281DRAFT_03957 0.88 -0.2 61,150 - H281DRAFT_03957 0.89 +0.8 61,153 + H281DRAFT_03957 0.89 -1.2 61,153 + H281DRAFT_03957 0.89 -0.1 61,305 - -0.1 61,310 + +0.1 61,310 + -0.2 61,310 + -0.4 61,311 - -0.2 61,311 - -0.8 61,311 - -0.9 61,424 + -1.3 61,424 + +0.1 61,424 + +1.6 61,771 - H281DRAFT_03958 0.46 -0.2 61,771 - H281DRAFT_03958 0.46 -0.9 61,771 - H281DRAFT_03958 0.46 -0.8 61,812 + H281DRAFT_03958 0.52 -0.6 61,813 - H281DRAFT_03958 0.52 -1.7 61,870 + H281DRAFT_03958 0.60 -2.3 61,870 + H281DRAFT_03958 0.60 -0.6 61,870 + H281DRAFT_03958 0.60 -2.2 61,870 + H281DRAFT_03958 0.60 -0.4 61,870 + H281DRAFT_03958 0.60 -0.7 61,871 - H281DRAFT_03958 0.60 +0.9 61,871 - H281DRAFT_03958 0.60 -1.0 62,102 + +0.7 62,152 + -0.3 62,152 + -0.7 62,162 - -1.3 62,165 + +0.0 62,165 + -0.1 62,166 - -0.5
Or see this region's nucleotide sequence