Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03942 and H281DRAFT_03943 are separated by 8 nucleotides H281DRAFT_03943 and H281DRAFT_03944 are separated by 82 nucleotides H281DRAFT_03944 and H281DRAFT_03945 are separated by 182 nucleotides
H281DRAFT_03942: H281DRAFT_03942 - formate dehydrogenase alpha subunit, at 41,889 to 44,840
_03942
H281DRAFT_03943: H281DRAFT_03943 - formate dehydrogenase delta subunit (EC 1.2.1.2), at 44,849 to 45,100
_03943
H281DRAFT_03944: H281DRAFT_03944 - 2-polyprenyl-6-methoxyphenol hydroxylase, at 45,183 to 46,907
_03944
H281DRAFT_03945: H281DRAFT_03945 - cobalt-zinc-cadmium efflux system protein, at 47,090 to 48,382
_03945
Position (kb) 45
46
47 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 44.241 kb on + strand, within H281DRAFT_03942 at 44.242 kb on - strand, within H281DRAFT_03942 at 44.242 kb on - strand, within H281DRAFT_03942 at 44.358 kb on - strand, within H281DRAFT_03942 at 44.436 kb on + strand, within H281DRAFT_03942 at 44.436 kb on + strand, within H281DRAFT_03942 at 44.436 kb on + strand, within H281DRAFT_03942 at 44.628 kb on - strand at 44.666 kb on + strand at 44.707 kb on - strand at 44.834 kb on + strand at 45.110 kb on + strand at 45.110 kb on + strand at 45.110 kb on + strand at 45.111 kb on - strand at 45.142 kb on - strand at 45.184 kb on + strand at 45.204 kb on + strand at 45.310 kb on + strand at 45.310 kb on + strand at 45.311 kb on - strand at 45.311 kb on - strand at 45.334 kb on + strand at 45.334 kb on + strand at 45.865 kb on + strand, within H281DRAFT_03944 at 45.865 kb on + strand, within H281DRAFT_03944 at 45.865 kb on + strand, within H281DRAFT_03944 at 45.866 kb on - strand, within H281DRAFT_03944 at 45.866 kb on - strand, within H281DRAFT_03944 at 45.978 kb on - strand, within H281DRAFT_03944 at 46.058 kb on - strand, within H281DRAFT_03944 at 46.058 kb on - strand, within H281DRAFT_03944 at 46.058 kb on - strand, within H281DRAFT_03944 at 46.429 kb on + strand, within H281DRAFT_03944 at 46.429 kb on + strand, within H281DRAFT_03944 at 46.430 kb on - strand, within H281DRAFT_03944 at 46.603 kb on + strand, within H281DRAFT_03944 at 46.604 kb on - strand, within H281DRAFT_03944 at 46.814 kb on + strand at 46.815 kb on - strand at 46.936 kb on + strand at 46.937 kb on - strand at 46.942 kb on - strand at 46.991 kb on + strand at 47.016 kb on - strand at 47.418 kb on + strand, within H281DRAFT_03945 at 47.476 kb on + strand, within H281DRAFT_03945 at 47.478 kb on + strand, within H281DRAFT_03945 at 47.537 kb on - strand, within H281DRAFT_03945 at 47.537 kb on - strand at 47.775 kb on + strand, within H281DRAFT_03945 at 47.898 kb on + strand, within H281DRAFT_03945 at 47.899 kb on - strand, within H281DRAFT_03945 at 47.899 kb on - strand, within H281DRAFT_03945 at 47.899 kb on - strand, within H281DRAFT_03945 at 47.899 kb on - strand, within H281DRAFT_03945 at 47.901 kb on - strand, within H281DRAFT_03945 at 47.901 kb on - strand, within H281DRAFT_03945 at 47.901 kb on - strand, within H281DRAFT_03945 at 47.901 kb on - strand, within H281DRAFT_03945
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 44,241 + H281DRAFT_03942 0.80 +0.4 44,242 - H281DRAFT_03942 0.80 +0.6 44,242 - H281DRAFT_03942 0.80 -0.2 44,358 - H281DRAFT_03942 0.84 +0.3 44,436 + H281DRAFT_03942 0.86 -1.2 44,436 + H281DRAFT_03942 0.86 +1.6 44,436 + H281DRAFT_03942 0.86 -1.5 44,628 - +0.2 44,666 + -0.7 44,707 - +3.4 44,834 + +0.3 45,110 + -0.2 45,110 + +1.1 45,110 + +0.8 45,111 - -0.1 45,142 - +0.7 45,184 + +1.0 45,204 + -0.3 45,310 + +0.1 45,310 + +2.1 45,311 - +0.6 45,311 - +0.2 45,334 + -0.1 45,334 + -2.1 45,865 + H281DRAFT_03944 0.40 -0.3 45,865 + H281DRAFT_03944 0.40 +0.5 45,865 + H281DRAFT_03944 0.40 -1.5 45,866 - H281DRAFT_03944 0.40 +0.8 45,866 - H281DRAFT_03944 0.40 +0.7 45,978 - H281DRAFT_03944 0.46 +0.6 46,058 - H281DRAFT_03944 0.51 +2.1 46,058 - H281DRAFT_03944 0.51 +1.6 46,058 - H281DRAFT_03944 0.51 +0.3 46,429 + H281DRAFT_03944 0.72 +0.5 46,429 + H281DRAFT_03944 0.72 -0.2 46,430 - H281DRAFT_03944 0.72 +0.2 46,603 + H281DRAFT_03944 0.82 +0.1 46,604 - H281DRAFT_03944 0.82 +0.9 46,814 + +1.0 46,815 - -0.1 46,936 + -0.2 46,937 - -3.8 46,942 - +0.3 46,991 + -1.0 47,016 - +1.8 47,418 + H281DRAFT_03945 0.25 -0.3 47,476 + H281DRAFT_03945 0.30 +0.4 47,478 + H281DRAFT_03945 0.30 -0.9 47,537 - H281DRAFT_03945 0.35 -0.9 47,537 - +1.1 47,775 + H281DRAFT_03945 0.53 +0.4 47,898 + H281DRAFT_03945 0.62 +0.5 47,899 - H281DRAFT_03945 0.63 -0.9 47,899 - H281DRAFT_03945 0.63 -0.8 47,899 - H281DRAFT_03945 0.63 -0.7 47,899 - H281DRAFT_03945 0.63 -0.1 47,901 - H281DRAFT_03945 0.63 -0.2 47,901 - H281DRAFT_03945 0.63 +0.3 47,901 - H281DRAFT_03945 0.63 -1.9 47,901 - H281DRAFT_03945 0.63 -2.5
Or see this region's nucleotide sequence