Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03893 and H281DRAFT_03894 are separated by 245 nucleotides H281DRAFT_03894 and H281DRAFT_03895 are separated by 527 nucleotides
H281DRAFT_03893: H281DRAFT_03893 - hypothetical protein, at 424,078 to 424,905
_03893
H281DRAFT_03894: H281DRAFT_03894 - 3-methylfumaryl-CoA hydratase, at 425,151 to 425,993
_03894
H281DRAFT_03895: H281DRAFT_03895 - Uncharacterized conserved protein YfaA, DUF2138 family, at 426,521 to 428,323
_03895
Position (kb) 425
426 Strain fitness (log2 ratio) -2
-1
0
1
2 at 424.194 kb on - strand, within H281DRAFT_03893 at 424.194 kb on - strand, within H281DRAFT_03893 at 424.195 kb on + strand, within H281DRAFT_03893 at 424.195 kb on + strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.389 kb on - strand, within H281DRAFT_03893 at 424.410 kb on + strand, within H281DRAFT_03893 at 424.410 kb on + strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.413 kb on - strand, within H281DRAFT_03893 at 424.413 kb on - strand, within H281DRAFT_03893 at 424.413 kb on - strand at 424.413 kb on - strand, within H281DRAFT_03893 at 424.427 kb on + strand, within H281DRAFT_03893 at 424.427 kb on + strand, within H281DRAFT_03893 at 424.427 kb on + strand, within H281DRAFT_03893 at 424.428 kb on - strand, within H281DRAFT_03893 at 424.428 kb on - strand, within H281DRAFT_03893 at 424.438 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.617 kb on - strand, within H281DRAFT_03893 at 424.622 kb on + strand, within H281DRAFT_03893 at 424.622 kb on + strand, within H281DRAFT_03893 at 424.623 kb on - strand, within H281DRAFT_03893 at 424.657 kb on + strand, within H281DRAFT_03893 at 424.689 kb on - strand, within H281DRAFT_03893 at 424.899 kb on + strand at 424.900 kb on - strand at 424.945 kb on + strand at 424.945 kb on + strand at 424.945 kb on + strand at 424.946 kb on - strand at 424.946 kb on - strand at 424.946 kb on - strand at 424.946 kb on - strand at 424.986 kb on + strand at 424.986 kb on + strand at 425.080 kb on - strand at 425.109 kb on + strand at 425.109 kb on + strand at 425.109 kb on + strand at 425.109 kb on + strand at 425.110 kb on - strand at 425.112 kb on + strand at 425.112 kb on + strand at 425.113 kb on - strand at 425.113 kb on - strand at 425.301 kb on + strand at 425.302 kb on - strand, within H281DRAFT_03894 at 425.302 kb on - strand, within H281DRAFT_03894 at 425.456 kb on + strand, within H281DRAFT_03894 at 425.581 kb on - strand, within H281DRAFT_03894 at 425.757 kb on + strand, within H281DRAFT_03894 at 425.936 kb on - strand at 425.959 kb on - strand at 425.959 kb on - strand at 426.070 kb on - strand at 426.131 kb on + strand at 426.170 kb on + strand at 426.170 kb on + strand at 426.171 kb on - strand at 426.259 kb on + strand at 426.260 kb on - strand at 426.453 kb on + strand at 426.490 kb on - strand at 426.490 kb on - strand at 426.492 kb on + strand at 426.536 kb on - strand at 426.761 kb on + strand, within H281DRAFT_03895 at 426.778 kb on + strand, within H281DRAFT_03895 at 426.779 kb on - strand, within H281DRAFT_03895
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 424,194 - H281DRAFT_03893 0.14 -0.0 424,194 - H281DRAFT_03893 0.14 -0.5 424,195 + H281DRAFT_03893 0.14 -0.9 424,195 + H281DRAFT_03893 0.14 -0.5 424,196 - H281DRAFT_03893 0.14 -0.3 424,196 - H281DRAFT_03893 0.14 -0.5 424,196 - H281DRAFT_03893 0.14 -0.0 424,196 - H281DRAFT_03893 0.14 -0.1 424,389 - H281DRAFT_03893 0.38 -0.2 424,410 + H281DRAFT_03893 0.40 -0.5 424,410 + H281DRAFT_03893 0.40 -0.3 424,411 - H281DRAFT_03893 0.40 +2.0 424,411 - H281DRAFT_03893 0.40 +0.7 424,411 - H281DRAFT_03893 0.40 +0.3 424,411 - H281DRAFT_03893 0.40 +0.5 424,411 - H281DRAFT_03893 0.40 -0.6 424,413 - H281DRAFT_03893 0.40 -1.3 424,413 - H281DRAFT_03893 0.40 -0.3 424,413 - +0.4 424,413 - H281DRAFT_03893 0.40 +0.2 424,427 + H281DRAFT_03893 0.42 -0.3 424,427 + H281DRAFT_03893 0.42 -0.6 424,427 + H281DRAFT_03893 0.42 -0.0 424,428 - H281DRAFT_03893 0.42 -0.1 424,428 - H281DRAFT_03893 0.42 -0.5 424,438 + H281DRAFT_03893 0.43 +1.7 424,616 + H281DRAFT_03893 0.65 -1.3 424,616 + H281DRAFT_03893 0.65 +0.4 424,616 + H281DRAFT_03893 0.65 -2.7 424,616 + H281DRAFT_03893 0.65 +0.6 424,617 - H281DRAFT_03893 0.65 -2.5 424,622 + H281DRAFT_03893 0.66 +0.9 424,622 + H281DRAFT_03893 0.66 +0.1 424,623 - H281DRAFT_03893 0.66 -0.4 424,657 + H281DRAFT_03893 0.70 -0.6 424,689 - H281DRAFT_03893 0.74 +0.1 424,899 + +0.8 424,900 - +0.5 424,945 + -0.0 424,945 + +0.4 424,945 + +0.4 424,946 - +0.6 424,946 - +0.5 424,946 - +0.0 424,946 - +2.2 424,986 + +0.6 424,986 + -0.8 425,080 - +2.1 425,109 + -2.3 425,109 + +1.1 425,109 + +1.2 425,109 + +2.0 425,110 - +0.1 425,112 + +0.4 425,112 + -1.0 425,113 - +1.0 425,113 - +0.7 425,301 + +0.7 425,302 - H281DRAFT_03894 0.18 +0.4 425,302 - H281DRAFT_03894 0.18 -0.1 425,456 + H281DRAFT_03894 0.36 -0.3 425,581 - H281DRAFT_03894 0.51 +0.1 425,757 + H281DRAFT_03894 0.72 -0.4 425,936 - -0.9 425,959 - -0.2 425,959 - -0.5 426,070 - +0.0 426,131 + +0.4 426,170 + -1.3 426,170 + -0.2 426,171 - +0.0 426,259 + +1.7 426,260 - -0.4 426,453 + -0.6 426,490 - -1.9 426,490 - -0.0 426,492 + +0.1 426,536 - +0.9 426,761 + H281DRAFT_03895 0.13 +1.1 426,778 + H281DRAFT_03895 0.14 +0.1 426,779 - H281DRAFT_03895 0.14 +0.1
Or see this region's nucleotide sequence