Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03854 and H281DRAFT_03855 overlap by 4 nucleotides H281DRAFT_03855 and H281DRAFT_03856 overlap by 4 nucleotides H281DRAFT_03856 and H281DRAFT_03857 are separated by 32 nucleotides
H281DRAFT_03854: H281DRAFT_03854 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 383,356 to 384,198
_03854
H281DRAFT_03855: H281DRAFT_03855 - Sugar phosphate isomerase/epimerase, at 384,195 to 385,043
_03855
H281DRAFT_03856: H281DRAFT_03856 - 3-oxoacyl-[acyl-carrier protein] reductase, at 385,040 to 385,780
_03856
H281DRAFT_03857: H281DRAFT_03857 - MFS transporter, ACS family, D-galactonate transporter, at 385,813 to 387,129
_03857
Position (kb) 385
386 Strain fitness (log2 ratio) -1
0
1 at 384.114 kb on - strand at 384.846 kb on + strand, within H281DRAFT_03855 at 384.846 kb on + strand, within H281DRAFT_03855 at 384.847 kb on - strand, within H281DRAFT_03855 at 385.076 kb on - strand at 385.076 kb on - strand at 385.299 kb on - strand, within H281DRAFT_03856 at 385.429 kb on - strand, within H281DRAFT_03856 at 385.482 kb on + strand, within H281DRAFT_03856 at 385.781 kb on - strand at 385.825 kb on - strand at 386.128 kb on + strand, within H281DRAFT_03857 at 386.129 kb on - strand, within H281DRAFT_03857 at 386.315 kb on + strand, within H281DRAFT_03857 at 386.436 kb on + strand, within H281DRAFT_03857 at 386.600 kb on + strand, within H281DRAFT_03857 at 386.600 kb on + strand, within H281DRAFT_03857 at 386.667 kb on - strand, within H281DRAFT_03857 at 386.709 kb on + strand, within H281DRAFT_03857 at 386.709 kb on + strand, within H281DRAFT_03857
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 384,114 - +0.7 384,846 + H281DRAFT_03855 0.77 +0.6 384,846 + H281DRAFT_03855 0.77 -0.9 384,847 - H281DRAFT_03855 0.77 +1.3 385,076 - -0.4 385,076 - -0.6 385,299 - H281DRAFT_03856 0.35 -0.3 385,429 - H281DRAFT_03856 0.52 -0.5 385,482 + H281DRAFT_03856 0.60 +0.9 385,781 - +0.3 385,825 - -1.1 386,128 + H281DRAFT_03857 0.24 +0.6 386,129 - H281DRAFT_03857 0.24 -0.0 386,315 + H281DRAFT_03857 0.38 -0.5 386,436 + H281DRAFT_03857 0.47 -0.1 386,600 + H281DRAFT_03857 0.60 +0.4 386,600 + H281DRAFT_03857 0.60 +0.4 386,667 - H281DRAFT_03857 0.65 -0.3 386,709 + H281DRAFT_03857 0.68 -1.2 386,709 + H281DRAFT_03857 0.68 -0.6
Or see this region's nucleotide sequence