Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03702 and H281DRAFT_03703 overlap by 4 nucleotides H281DRAFT_03703 and H281DRAFT_03704 overlap by 4 nucleotides H281DRAFT_03704 and H281DRAFT_03705 are separated by 174 nucleotides
H281DRAFT_03702: H281DRAFT_03702 - transcriptional regulator, MarR family, at 214,918 to 215,490
_03702
H281DRAFT_03703: H281DRAFT_03703 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 215,487 to 216,260
_03703
H281DRAFT_03704: H281DRAFT_03704 - anthraniloyl-CoA monooxygenase, at 216,257 to 218,629
_03704
H281DRAFT_03705: H281DRAFT_03705 - transcriptional regulator, GntR family, at 218,804 to 220,135
_03705
Position (kb) 216
217
218
219 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 215.705 kb on - strand, within H281DRAFT_03703 at 215.813 kb on - strand, within H281DRAFT_03703 at 216.803 kb on + strand, within H281DRAFT_03704 at 216.879 kb on + strand, within H281DRAFT_03704 at 217.018 kb on - strand, within H281DRAFT_03704 at 217.171 kb on + strand, within H281DRAFT_03704 at 217.172 kb on - strand, within H281DRAFT_03704 at 217.203 kb on + strand, within H281DRAFT_03704 at 217.204 kb on - strand, within H281DRAFT_03704 at 217.448 kb on + strand, within H281DRAFT_03704 at 218.183 kb on - strand, within H281DRAFT_03704 at 218.253 kb on + strand, within H281DRAFT_03704 at 218.516 kb on - strand at 218.667 kb on + strand at 218.808 kb on + strand at 218.809 kb on - strand at 218.809 kb on - strand at 219.463 kb on - strand, within H281DRAFT_03705 at 219.589 kb on - strand, within H281DRAFT_03705
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 215,705 - H281DRAFT_03703 0.28 +0.3 215,813 - H281DRAFT_03703 0.42 -0.3 216,803 + H281DRAFT_03704 0.23 +0.1 216,879 + H281DRAFT_03704 0.26 -0.4 217,018 - H281DRAFT_03704 0.32 +3.7 217,171 + H281DRAFT_03704 0.39 -0.0 217,172 - H281DRAFT_03704 0.39 -2.4 217,203 + H281DRAFT_03704 0.40 +1.0 217,204 - H281DRAFT_03704 0.40 +0.1 217,448 + H281DRAFT_03704 0.50 +0.0 218,183 - H281DRAFT_03704 0.81 -0.1 218,253 + H281DRAFT_03704 0.84 -0.6 218,516 - +0.1 218,667 + +0.4 218,808 + -0.7 218,809 - -0.5 218,809 - +1.1 219,463 - H281DRAFT_03705 0.49 -1.7 219,589 - H281DRAFT_03705 0.59 -0.4
Or see this region's nucleotide sequence