Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03609 and H281DRAFT_03610 overlap by 4 nucleotides H281DRAFT_03610 and H281DRAFT_03611 are separated by 3 nucleotides H281DRAFT_03611 and H281DRAFT_03612 are separated by 46 nucleotides
H281DRAFT_03609: H281DRAFT_03609 - squalene-associated FAD-dependent desaturase, at 117,671 to 118,921
_03609
H281DRAFT_03610: H281DRAFT_03610 - squalene-hopene/tetraprenyl-beta-curcumene cyclase, at 118,918 to 120,978
_03610
H281DRAFT_03611: H281DRAFT_03611 - hopanoid-associated phosphorylase, at 120,982 to 121,710
_03611
H281DRAFT_03612: H281DRAFT_03612 - phospholipid-binding lipoprotein MlaA, at 121,757 to 122,827
_03612
Position (kb) 118
119
120
121 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 118.031 kb on + strand, within H281DRAFT_03609 at 118.610 kb on + strand, within H281DRAFT_03609 at 118.802 kb on - strand at 118.888 kb on + strand at 118.929 kb on - strand at 119.182 kb on + strand, within H281DRAFT_03610 at 119.314 kb on + strand, within H281DRAFT_03610 at 119.470 kb on - strand at 119.571 kb on - strand at 119.860 kb on + strand, within H281DRAFT_03610 at 119.861 kb on - strand, within H281DRAFT_03610 at 120.160 kb on + strand, within H281DRAFT_03610 at 120.331 kb on + strand, within H281DRAFT_03610 at 120.332 kb on - strand, within H281DRAFT_03610 at 120.334 kb on + strand, within H281DRAFT_03610 at 120.476 kb on - strand, within H281DRAFT_03610 at 120.538 kb on + strand, within H281DRAFT_03610 at 120.539 kb on - strand, within H281DRAFT_03610 at 120.797 kb on - strand at 120.976 kb on + strand at 120.977 kb on - strand at 120.977 kb on - strand at 121.100 kb on - strand, within H281DRAFT_03611 at 121.206 kb on - strand, within H281DRAFT_03611 at 121.510 kb on - strand at 121.510 kb on - strand, within H281DRAFT_03611 at 121.759 kb on - strand at 121.759 kb on - strand at 121.759 kb on - strand at 121.759 kb on - strand at 121.793 kb on - strand at 121.793 kb on - strand at 121.888 kb on + strand, within H281DRAFT_03612
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 118,031 + H281DRAFT_03609 0.29 +0.1 118,610 + H281DRAFT_03609 0.75 -0.3 118,802 - +1.6 118,888 + -0.2 118,929 - +1.6 119,182 + H281DRAFT_03610 0.13 -0.6 119,314 + H281DRAFT_03610 0.19 +0.8 119,470 - +1.1 119,571 - +0.1 119,860 + H281DRAFT_03610 0.46 +0.1 119,861 - H281DRAFT_03610 0.46 -0.4 120,160 + H281DRAFT_03610 0.60 -1.7 120,331 + H281DRAFT_03610 0.69 -0.4 120,332 - H281DRAFT_03610 0.69 -0.4 120,334 + H281DRAFT_03610 0.69 +1.1 120,476 - H281DRAFT_03610 0.76 -0.1 120,538 + H281DRAFT_03610 0.79 +0.1 120,539 - H281DRAFT_03610 0.79 -0.9 120,797 - -1.0 120,976 + +0.9 120,977 - +2.1 120,977 - +0.7 121,100 - H281DRAFT_03611 0.16 +4.1 121,206 - H281DRAFT_03611 0.31 +1.0 121,510 - -0.4 121,510 - H281DRAFT_03611 0.72 +0.4 121,759 - +0.0 121,759 - -0.3 121,759 - -0.4 121,759 - +1.1 121,793 - +0.6 121,793 - +0.4 121,888 + H281DRAFT_03612 0.12 +0.3
Or see this region's nucleotide sequence