Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03548 and H281DRAFT_03549 are separated by 102 nucleotides H281DRAFT_03549 and H281DRAFT_03550 are separated by 48 nucleotides H281DRAFT_03550 and H281DRAFT_03551 are separated by 291 nucleotides
H281DRAFT_03548: H281DRAFT_03548 - H+/gluconate symporter, at 49,134 to 50,534
_03548
H281DRAFT_03549: H281DRAFT_03549 - reactive intermediate/imine deaminase, at 50,637 to 51,038
_03549
H281DRAFT_03550: H281DRAFT_03550 - two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC, at 51,087 to 54,605
_03550
H281DRAFT_03551: H281DRAFT_03551 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor, at 54,897 to 56,603
_03551
Position (kb) 51
52
53
54
55 Strain fitness (log2 ratio) -1
0
1
2 at 50.115 kb on - strand, within H281DRAFT_03548 at 50.127 kb on + strand, within H281DRAFT_03548 at 50.127 kb on + strand, within H281DRAFT_03548 at 50.328 kb on - strand, within H281DRAFT_03548 at 50.394 kb on - strand, within H281DRAFT_03548 at 50.449 kb on - strand at 50.512 kb on - strand at 50.514 kb on + strand at 50.532 kb on + strand at 50.788 kb on + strand, within H281DRAFT_03549 at 50.904 kb on + strand, within H281DRAFT_03549 at 50.934 kb on + strand, within H281DRAFT_03549 at 50.935 kb on - strand, within H281DRAFT_03549 at 51.201 kb on + strand at 51.202 kb on - strand at 51.202 kb on - strand at 51.209 kb on + strand at 51.209 kb on + strand at 51.209 kb on + strand at 51.315 kb on + strand at 51.658 kb on - strand, within H281DRAFT_03550 at 51.957 kb on + strand, within H281DRAFT_03550 at 52.060 kb on + strand, within H281DRAFT_03550 at 52.296 kb on + strand, within H281DRAFT_03550 at 52.694 kb on - strand, within H281DRAFT_03550 at 52.725 kb on + strand, within H281DRAFT_03550 at 52.787 kb on + strand, within H281DRAFT_03550 at 52.787 kb on + strand, within H281DRAFT_03550 at 53.078 kb on - strand, within H281DRAFT_03550 at 53.078 kb on - strand, within H281DRAFT_03550 at 53.151 kb on + strand, within H281DRAFT_03550 at 53.332 kb on - strand, within H281DRAFT_03550 at 53.567 kb on - strand, within H281DRAFT_03550 at 53.567 kb on - strand, within H281DRAFT_03550 at 53.605 kb on + strand, within H281DRAFT_03550 at 53.606 kb on - strand, within H281DRAFT_03550 at 53.629 kb on + strand, within H281DRAFT_03550 at 53.629 kb on + strand, within H281DRAFT_03550 at 53.836 kb on + strand, within H281DRAFT_03550 at 53.836 kb on + strand, within H281DRAFT_03550 at 53.837 kb on - strand, within H281DRAFT_03550 at 54.158 kb on - strand, within H281DRAFT_03550 at 54.328 kb on + strand at 54.331 kb on + strand at 54.332 kb on - strand at 54.332 kb on - strand at 54.332 kb on - strand at 54.335 kb on - strand at 54.518 kb on - strand at 54.518 kb on - strand at 54.688 kb on + strand at 54.689 kb on - strand at 54.800 kb on - strand at 54.838 kb on - strand at 55.026 kb on - strand at 55.284 kb on + strand, within H281DRAFT_03551
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 50,115 - H281DRAFT_03548 0.70 -0.2 50,127 + H281DRAFT_03548 0.71 +0.1 50,127 + H281DRAFT_03548 0.71 +0.4 50,328 - H281DRAFT_03548 0.85 -0.7 50,394 - H281DRAFT_03548 0.90 -0.4 50,449 - +0.1 50,512 - +1.4 50,514 + -0.5 50,532 + -0.6 50,788 + H281DRAFT_03549 0.38 +1.9 50,904 + H281DRAFT_03549 0.66 -0.8 50,934 + H281DRAFT_03549 0.74 +0.0 50,935 - H281DRAFT_03549 0.74 +0.8 51,201 + +0.2 51,202 - +0.1 51,202 - +1.6 51,209 + +0.6 51,209 + -0.2 51,209 + -0.1 51,315 + +0.6 51,658 - H281DRAFT_03550 0.16 +1.1 51,957 + H281DRAFT_03550 0.25 +0.1 52,060 + H281DRAFT_03550 0.28 -0.3 52,296 + H281DRAFT_03550 0.34 +0.4 52,694 - H281DRAFT_03550 0.46 -0.0 52,725 + H281DRAFT_03550 0.47 -0.2 52,787 + H281DRAFT_03550 0.48 +0.1 52,787 + H281DRAFT_03550 0.48 -1.3 53,078 - H281DRAFT_03550 0.57 +0.3 53,078 - H281DRAFT_03550 0.57 -0.2 53,151 + H281DRAFT_03550 0.59 +0.1 53,332 - H281DRAFT_03550 0.64 -0.5 53,567 - H281DRAFT_03550 0.70 +0.1 53,567 - H281DRAFT_03550 0.70 +0.2 53,605 + H281DRAFT_03550 0.72 -0.2 53,606 - H281DRAFT_03550 0.72 +0.1 53,629 + H281DRAFT_03550 0.72 -0.6 53,629 + H281DRAFT_03550 0.72 -1.0 53,836 + H281DRAFT_03550 0.78 +0.1 53,836 + H281DRAFT_03550 0.78 -0.1 53,837 - H281DRAFT_03550 0.78 -0.8 54,158 - H281DRAFT_03550 0.87 -0.9 54,328 + -0.0 54,331 + -0.1 54,332 - +2.7 54,332 - +0.4 54,332 - -0.3 54,335 - +0.6 54,518 - -1.2 54,518 - -0.6 54,688 + +0.6 54,689 - +0.7 54,800 - -0.6 54,838 - -0.2 55,026 - -0.6 55,284 + H281DRAFT_03551 0.23 +0.1
Or see this region's nucleotide sequence