Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03520 and H281DRAFT_03521 are separated by 129 nucleotides H281DRAFT_03521 and H281DRAFT_03522 are separated by 164 nucleotides H281DRAFT_03522 and H281DRAFT_03523 are separated by 247 nucleotides
H281DRAFT_03520: H281DRAFT_03520 - hypothetical protein, at 19,885 to 21,225
_03520
H281DRAFT_03521: H281DRAFT_03521 - hypothetical protein, at 21,355 to 21,585
_03521
H281DRAFT_03522: H281DRAFT_03522 - Uncharacterized membrane protein, at 21,750 to 22,040
_03522
H281DRAFT_03523: H281DRAFT_03523 - mannose-6-phosphate isomerase, at 22,288 to 23,397
_03523
Position (kb) 21
22
23 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 21.209 kb on - strand at 21.226 kb on - strand at 21.428 kb on + strand, within H281DRAFT_03521 at 21.457 kb on - strand at 21.457 kb on - strand at 21.689 kb on + strand at 21.690 kb on - strand at 21.882 kb on - strand, within H281DRAFT_03522 at 21.883 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.930 kb on - strand, within H281DRAFT_03522 at 21.930 kb on - strand, within H281DRAFT_03522 at 22.063 kb on + strand at 22.063 kb on + strand at 22.116 kb on + strand at 22.116 kb on + strand at 22.117 kb on - strand at 22.117 kb on - strand at 22.122 kb on - strand at 22.122 kb on - strand at 22.225 kb on + strand at 22.283 kb on + strand at 22.283 kb on + strand at 22.283 kb on + strand at 22.283 kb on + strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.288 kb on - strand at 22.288 kb on - strand at 22.522 kb on + strand, within H281DRAFT_03523 at 22.549 kb on - strand, within H281DRAFT_03523 at 22.588 kb on + strand, within H281DRAFT_03523 at 22.636 kb on + strand, within H281DRAFT_03523 at 22.637 kb on - strand, within H281DRAFT_03523 at 22.673 kb on - strand, within H281DRAFT_03523 at 22.836 kb on - strand, within H281DRAFT_03523
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 21,209 - +3.3 21,226 - +0.2 21,428 + H281DRAFT_03521 0.32 -0.1 21,457 - +3.7 21,457 - -0.4 21,689 + +0.8 21,690 - +0.8 21,882 - H281DRAFT_03522 0.45 +1.1 21,883 + H281DRAFT_03522 0.46 -0.1 21,921 + H281DRAFT_03522 0.59 -0.7 21,921 + H281DRAFT_03522 0.59 -0.1 21,921 + H281DRAFT_03522 0.59 -0.0 21,922 - H281DRAFT_03522 0.59 -1.5 21,922 - H281DRAFT_03522 0.59 +1.2 21,922 - H281DRAFT_03522 0.59 +0.1 21,929 + H281DRAFT_03522 0.62 +1.3 21,929 + H281DRAFT_03522 0.62 +0.3 21,929 + H281DRAFT_03522 0.62 +0.1 21,929 + H281DRAFT_03522 0.62 +0.9 21,929 + H281DRAFT_03522 0.62 -0.3 21,929 + H281DRAFT_03522 0.62 -0.6 21,930 - H281DRAFT_03522 0.62 +0.2 21,930 - H281DRAFT_03522 0.62 +0.2 22,063 + -2.6 22,063 + +0.1 22,116 + +0.3 22,116 + +0.9 22,117 - -1.3 22,117 - -0.6 22,122 - -0.2 22,122 - +0.6 22,225 + -0.0 22,283 + +1.1 22,283 + +0.2 22,283 + -0.7 22,283 + -0.2 22,284 - -0.7 22,284 - -0.1 22,284 - +2.9 22,284 - +1.4 22,284 - +0.5 22,284 - -0.3 22,284 - +0.1 22,287 + +0.2 22,287 + +0.0 22,287 + +0.2 22,287 + -0.7 22,287 + +0.2 22,287 + -0.0 22,288 - +0.4 22,288 - +0.3 22,522 + H281DRAFT_03523 0.21 +1.3 22,549 - H281DRAFT_03523 0.24 +0.5 22,588 + H281DRAFT_03523 0.27 +0.5 22,636 + H281DRAFT_03523 0.31 +0.6 22,637 - H281DRAFT_03523 0.31 +0.7 22,673 - H281DRAFT_03523 0.35 -0.9 22,836 - H281DRAFT_03523 0.49 +0.7
Or see this region's nucleotide sequence