Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03518 and H281DRAFT_03519 are separated by 439 nucleotides H281DRAFT_03519 and H281DRAFT_03520 are separated by 370 nucleotides H281DRAFT_03520 and H281DRAFT_03521 are separated by 129 nucleotides H281DRAFT_03521 and H281DRAFT_03522 are separated by 164 nucleotides
H281DRAFT_03518: H281DRAFT_03518 - hypothetical protein, at 18,611 to 18,916
_03518
H281DRAFT_03519: H281DRAFT_03519 - hypothetical protein, at 19,356 to 19,514
_03519
H281DRAFT_03520: H281DRAFT_03520 - hypothetical protein, at 19,885 to 21,225
_03520
H281DRAFT_03521: H281DRAFT_03521 - hypothetical protein, at 21,355 to 21,585
_03521
H281DRAFT_03522: H281DRAFT_03522 - Uncharacterized membrane protein, at 21,750 to 22,040
_03522
Position (kb) 19
20
21
22 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 18.916 kb on + strand at 18.916 kb on + strand at 18.916 kb on + strand at 18.917 kb on - strand at 18.917 kb on - strand at 18.917 kb on - strand at 18.917 kb on - strand at 19.090 kb on - strand at 19.172 kb on - strand at 19.193 kb on + strand at 19.224 kb on + strand at 19.225 kb on - strand at 19.225 kb on - strand at 19.225 kb on - strand at 19.226 kb on + strand at 19.226 kb on + strand at 19.226 kb on + strand at 19.227 kb on - strand at 19.354 kb on + strand at 19.355 kb on - strand at 19.355 kb on - strand at 19.355 kb on - strand at 19.355 kb on - strand at 19.357 kb on + strand at 19.357 kb on + strand at 19.432 kb on + strand, within H281DRAFT_03519 at 19.438 kb on + strand, within H281DRAFT_03519 at 19.439 kb on - strand, within H281DRAFT_03519 at 19.531 kb on + strand at 19.532 kb on - strand at 19.607 kb on + strand at 19.607 kb on + strand at 19.607 kb on + strand at 19.607 kb on + strand at 19.608 kb on - strand at 19.608 kb on - strand at 19.664 kb on - strand at 19.664 kb on - strand at 19.743 kb on + strand at 19.744 kb on - strand at 19.744 kb on - strand at 19.744 kb on - strand at 20.740 kb on + strand, within H281DRAFT_03520 at 20.743 kb on + strand, within H281DRAFT_03520 at 20.743 kb on + strand, within H281DRAFT_03520 at 20.743 kb on + strand, within H281DRAFT_03520 at 20.743 kb on + strand, within H281DRAFT_03520 at 20.744 kb on - strand, within H281DRAFT_03520 at 20.744 kb on - strand, within H281DRAFT_03520 at 21.209 kb on - strand at 21.226 kb on - strand at 21.428 kb on + strand, within H281DRAFT_03521 at 21.457 kb on - strand at 21.457 kb on - strand at 21.689 kb on + strand at 21.690 kb on - strand at 21.882 kb on - strand, within H281DRAFT_03522 at 21.883 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.930 kb on - strand, within H281DRAFT_03522 at 21.930 kb on - strand, within H281DRAFT_03522 at 22.063 kb on + strand at 22.063 kb on + strand at 22.116 kb on + strand at 22.116 kb on + strand at 22.117 kb on - strand at 22.117 kb on - strand at 22.122 kb on - strand at 22.122 kb on - strand at 22.225 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 18,916 + -0.4 18,916 + -0.0 18,916 + -0.1 18,917 - -0.4 18,917 - +0.1 18,917 - +1.8 18,917 - -0.0 19,090 - +0.6 19,172 - +0.2 19,193 + -0.5 19,224 + +0.4 19,225 - +0.2 19,225 - +0.1 19,225 - +0.4 19,226 + +0.7 19,226 + -0.4 19,226 + +0.8 19,227 - -0.4 19,354 + -0.7 19,355 - -0.7 19,355 - +0.0 19,355 - -0.2 19,355 - +0.0 19,357 + -1.4 19,357 + +0.7 19,432 + H281DRAFT_03519 0.48 -0.9 19,438 + H281DRAFT_03519 0.52 -0.5 19,439 - H281DRAFT_03519 0.52 -1.6 19,531 + +0.6 19,532 - +0.2 19,607 + -1.1 19,607 + +1.1 19,607 + +0.3 19,607 + +0.3 19,608 - +0.1 19,608 - +0.5 19,664 - +0.2 19,664 - -1.0 19,743 + +1.4 19,744 - -2.7 19,744 - +1.1 19,744 - +0.4 20,740 + H281DRAFT_03520 0.64 +1.3 20,743 + H281DRAFT_03520 0.64 +0.1 20,743 + H281DRAFT_03520 0.64 -1.7 20,743 + H281DRAFT_03520 0.64 +0.7 20,743 + H281DRAFT_03520 0.64 -0.6 20,744 - H281DRAFT_03520 0.64 +0.0 20,744 - H281DRAFT_03520 0.64 -1.3 21,209 - +3.3 21,226 - +0.2 21,428 + H281DRAFT_03521 0.32 -0.1 21,457 - +3.7 21,457 - -0.4 21,689 + +0.8 21,690 - +0.8 21,882 - H281DRAFT_03522 0.45 +1.1 21,883 + H281DRAFT_03522 0.46 -0.1 21,921 + H281DRAFT_03522 0.59 -0.7 21,921 + H281DRAFT_03522 0.59 -0.1 21,921 + H281DRAFT_03522 0.59 -0.0 21,922 - H281DRAFT_03522 0.59 -1.5 21,922 - H281DRAFT_03522 0.59 +1.2 21,922 - H281DRAFT_03522 0.59 +0.1 21,929 + H281DRAFT_03522 0.62 +1.3 21,929 + H281DRAFT_03522 0.62 +0.3 21,929 + H281DRAFT_03522 0.62 +0.1 21,929 + H281DRAFT_03522 0.62 +0.9 21,929 + H281DRAFT_03522 0.62 -0.3 21,929 + H281DRAFT_03522 0.62 -0.6 21,930 - H281DRAFT_03522 0.62 +0.2 21,930 - H281DRAFT_03522 0.62 +0.2 22,063 + -2.6 22,063 + +0.1 22,116 + +0.3 22,116 + +0.9 22,117 - -1.3 22,117 - -0.6 22,122 - -0.2 22,122 - +0.6 22,225 + -0.0
Or see this region's nucleotide sequence