Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03425

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03424 and H281DRAFT_03425 are separated by 132 nucleotidesH281DRAFT_03425 and H281DRAFT_03426 are separated by 349 nucleotides H281DRAFT_03424: H281DRAFT_03424 - Sugar phosphate permease, at 498,337 to 499,665 _03424 H281DRAFT_03425: H281DRAFT_03425 - transcriptional regulator, LacI family, at 499,798 to 500,865 _03425 H281DRAFT_03426: H281DRAFT_03426 - cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-), at 501,215 to 502,108 _03426 Position (kb) 499 500 501Strain fitness (log2 ratio) -1 0 1at 498.911 kb on + strand, within H281DRAFT_03424at 499.099 kb on + strand, within H281DRAFT_03424at 499.102 kb on + strand, within H281DRAFT_03424at 499.172 kb on + strand, within H281DRAFT_03424at 499.173 kb on - strand, within H281DRAFT_03424at 499.176 kb on + strand, within H281DRAFT_03424at 499.176 kb on + strand, within H281DRAFT_03424at 499.177 kb on - strand, within H281DRAFT_03424at 499.179 kb on + strand, within H281DRAFT_03424at 499.179 kb on + strand, within H281DRAFT_03424at 499.390 kb on + strand, within H281DRAFT_03424at 499.391 kb on - strand, within H281DRAFT_03424at 500.880 kb on + strandat 501.084 kb on - strandat 501.145 kb on + strandat 501.146 kb on - strandat 501.180 kb on - strandat 501.214 kb on + strandat 501.214 kb on + strandat 501.215 kb on - strandat 501.449 kb on + strand, within H281DRAFT_03426at 501.449 kb on + strand, within H281DRAFT_03426at 501.449 kb on + strand, within H281DRAFT_03426at 501.449 kb on + strand, within H281DRAFT_03426at 501.824 kb on + strand, within H281DRAFT_03426

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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498,911 + H281DRAFT_03424 0.43 +0.1
499,099 + H281DRAFT_03424 0.57 +1.2
499,102 + H281DRAFT_03424 0.58 +0.2
499,172 + H281DRAFT_03424 0.63 +1.5
499,173 - H281DRAFT_03424 0.63 -0.5
499,176 + H281DRAFT_03424 0.63 +0.1
499,176 + H281DRAFT_03424 0.63 +0.9
499,177 - H281DRAFT_03424 0.63 -1.4
499,179 + H281DRAFT_03424 0.63 +0.9
499,179 + H281DRAFT_03424 0.63 +0.2
499,390 + H281DRAFT_03424 0.79 +1.0
499,391 - H281DRAFT_03424 0.79 -1.1
500,880 + -0.3
501,084 - -0.3
501,145 + +0.5
501,146 - +1.2
501,180 - -0.1
501,214 + -1.0
501,214 + -0.2
501,215 - +1.5
501,449 + H281DRAFT_03426 0.26 +0.1
501,449 + H281DRAFT_03426 0.26 -0.5
501,449 + H281DRAFT_03426 0.26 -0.8
501,449 + H281DRAFT_03426 0.26 -0.6
501,824 + H281DRAFT_03426 0.68 -0.7

Or see this region's nucleotide sequence