Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03402

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03400 and H281DRAFT_03401 overlap by 14 nucleotidesH281DRAFT_03401 and H281DRAFT_03402 are separated by 84 nucleotidesH281DRAFT_03402 and H281DRAFT_03403 are separated by 472 nucleotides H281DRAFT_03400: H281DRAFT_03400 - cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein (EC 1.10.3.10), at 469,821 to 471,218 _03400 H281DRAFT_03401: H281DRAFT_03401 - hypothetical protein, at 471,205 to 471,786 _03401 H281DRAFT_03402: H281DRAFT_03402 - hypothetical protein, at 471,871 to 472,188 _03402 H281DRAFT_03403: H281DRAFT_03403 - Predicted ATPase, at 472,661 to 474,166 _03403 Position (kb) 471 472 473Strain fitness (log2 ratio) -1 0 1at 471.164 kb on + strandat 471.758 kb on + strandat 472.401 kb on + strandat 472.402 kb on - strandat 472.562 kb on - strandat 472.619 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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471,164 + +0.9
471,758 + -0.6
472,401 + -0.3
472,402 - -0.1
472,562 - +0.9
472,619 - +0.7

Or see this region's nucleotide sequence