Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03360 and H281DRAFT_03361 are separated by 12 nucleotides H281DRAFT_03361 and H281DRAFT_03362 are separated by 20 nucleotides H281DRAFT_03362 and H281DRAFT_03363 are separated by 12 nucleotides
H281DRAFT_03360: H281DRAFT_03360 - succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase, at 419,293 to 420,774
_03360
H281DRAFT_03361: H281DRAFT_03361 - 2-keto-3-deoxy-L-rhamnonate aldolase RhmA, at 420,787 to 421,611
_03361
H281DRAFT_03362: H281DRAFT_03362 - Acyl-CoA dehydrogenase, at 421,632 to 422,813
_03362
H281DRAFT_03363: H281DRAFT_03363 - fumarate reductase (CoM/CoB) subunit A, at 422,826 to 424,604
_03363
Position (kb) 421
422
423 Strain fitness (log2 ratio) -1
0
1
2 at 420.709 kb on + strand at 421.087 kb on - strand, within H281DRAFT_03361 at 421.116 kb on + strand, within H281DRAFT_03361 at 421.116 kb on + strand, within H281DRAFT_03361 at 421.117 kb on - strand, within H281DRAFT_03361 at 421.365 kb on + strand, within H281DRAFT_03361 at 421.365 kb on + strand, within H281DRAFT_03361 at 421.444 kb on + strand, within H281DRAFT_03361 at 421.468 kb on + strand, within H281DRAFT_03361 at 421.676 kb on + strand at 421.684 kb on - strand at 421.755 kb on + strand, within H281DRAFT_03362 at 421.755 kb on + strand, within H281DRAFT_03362 at 421.756 kb on - strand, within H281DRAFT_03362 at 421.989 kb on - strand, within H281DRAFT_03362 at 422.119 kb on + strand, within H281DRAFT_03362 at 422.120 kb on - strand, within H281DRAFT_03362 at 422.166 kb on + strand, within H281DRAFT_03362 at 422.166 kb on + strand, within H281DRAFT_03362 at 422.167 kb on - strand, within H281DRAFT_03362 at 422.169 kb on - strand, within H281DRAFT_03362 at 422.238 kb on - strand, within H281DRAFT_03362 at 422.313 kb on + strand, within H281DRAFT_03362 at 422.464 kb on - strand, within H281DRAFT_03362 at 422.635 kb on - strand, within H281DRAFT_03362 at 422.648 kb on + strand, within H281DRAFT_03362 at 422.648 kb on + strand, within H281DRAFT_03362 at 422.648 kb on + strand, within H281DRAFT_03362 at 422.652 kb on + strand, within H281DRAFT_03362 at 422.653 kb on - strand, within H281DRAFT_03362 at 423.076 kb on - strand, within H281DRAFT_03363 at 423.237 kb on + strand, within H281DRAFT_03363 at 423.237 kb on + strand, within H281DRAFT_03363 at 423.314 kb on - strand, within H281DRAFT_03363 at 423.362 kb on + strand, within H281DRAFT_03363 at 423.363 kb on - strand, within H281DRAFT_03363 at 423.363 kb on - strand at 423.592 kb on - strand, within H281DRAFT_03363 at 423.672 kb on + strand, within H281DRAFT_03363
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 420,709 + -1.0 421,087 - H281DRAFT_03361 0.36 +1.0 421,116 + H281DRAFT_03361 0.40 -0.3 421,116 + H281DRAFT_03361 0.40 -0.2 421,117 - H281DRAFT_03361 0.40 -0.2 421,365 + H281DRAFT_03361 0.70 +1.0 421,365 + H281DRAFT_03361 0.70 -1.6 421,444 + H281DRAFT_03361 0.80 +0.3 421,468 + H281DRAFT_03361 0.83 +0.1 421,676 + -0.1 421,684 - +2.7 421,755 + H281DRAFT_03362 0.10 -1.4 421,755 + H281DRAFT_03362 0.10 +0.6 421,756 - H281DRAFT_03362 0.10 -0.2 421,989 - H281DRAFT_03362 0.30 -0.3 422,119 + H281DRAFT_03362 0.41 -0.2 422,120 - H281DRAFT_03362 0.41 +1.5 422,166 + H281DRAFT_03362 0.45 -0.8 422,166 + H281DRAFT_03362 0.45 +0.1 422,167 - H281DRAFT_03362 0.45 -1.6 422,169 - H281DRAFT_03362 0.45 +0.0 422,238 - H281DRAFT_03362 0.51 -0.5 422,313 + H281DRAFT_03362 0.58 +1.2 422,464 - H281DRAFT_03362 0.70 +0.4 422,635 - H281DRAFT_03362 0.85 +0.1 422,648 + H281DRAFT_03362 0.86 +0.0 422,648 + H281DRAFT_03362 0.86 +0.1 422,648 + H281DRAFT_03362 0.86 -0.5 422,652 + H281DRAFT_03362 0.86 +0.1 422,653 - H281DRAFT_03362 0.86 +0.3 423,076 - H281DRAFT_03363 0.14 +0.7 423,237 + H281DRAFT_03363 0.23 +0.1 423,237 + H281DRAFT_03363 0.23 +1.1 423,314 - H281DRAFT_03363 0.27 -1.2 423,362 + H281DRAFT_03363 0.30 +0.4 423,363 - H281DRAFT_03363 0.30 +0.1 423,363 - +0.9 423,592 - H281DRAFT_03363 0.43 -1.6 423,672 + H281DRAFT_03363 0.48 -0.2
Or see this region's nucleotide sequence