Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02971

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02970 and H281DRAFT_02971 overlap by 4 nucleotidesH281DRAFT_02971 and H281DRAFT_02972 are separated by 146 nucleotides H281DRAFT_02970: H281DRAFT_02970 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 584,309 to 585,730 _02970 H281DRAFT_02971: H281DRAFT_02971 - Protein of unknown function (DUF3225), at 585,727 to 586,107 _02971 H281DRAFT_02972: H281DRAFT_02972 - hypothetical protein, at 586,254 to 586,850 _02972 Position (kb) 585 586 587Strain fitness (log2 ratio) -1 0 1at 584.904 kb on - strand, within H281DRAFT_02970at 584.999 kb on + strand, within H281DRAFT_02970at 585.107 kb on + strand, within H281DRAFT_02970at 585.410 kb on + strand, within H281DRAFT_02970at 585.964 kb on - strand, within H281DRAFT_02971at 585.967 kb on + strand, within H281DRAFT_02971at 586.256 kb on - strandat 586.372 kb on + strand, within H281DRAFT_02972at 586.372 kb on + strand, within H281DRAFT_02972at 586.477 kb on - strand, within H281DRAFT_02972at 586.865 kb on + strandat 587.074 kb on - strandat 587.074 kb on - strandat 587.074 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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584,904 - H281DRAFT_02970 0.42 +1.7
584,999 + H281DRAFT_02970 0.49 -0.0
585,107 + H281DRAFT_02970 0.56 +0.2
585,410 + H281DRAFT_02970 0.77 +0.2
585,964 - H281DRAFT_02971 0.62 -0.7
585,967 + H281DRAFT_02971 0.63 +0.2
586,256 - -1.2
586,372 + H281DRAFT_02972 0.20 +0.4
586,372 + H281DRAFT_02972 0.20 -0.2
586,477 - H281DRAFT_02972 0.37 -0.4
586,865 + -0.1
587,074 - +0.0
587,074 - -0.1
587,074 - +0.5

Or see this region's nucleotide sequence