Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02474

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02473 and H281DRAFT_02474 overlap by 4 nucleotidesH281DRAFT_02474 and H281DRAFT_02475 are separated by 73 nucleotides H281DRAFT_02473: H281DRAFT_02473 - electron transfer flavoprotein alpha subunit apoprotein, at 44,222 to 45,391 _02473 H281DRAFT_02474: H281DRAFT_02474 - electron transfer flavoprotein beta subunit, at 45,388 to 46,164 _02474 H281DRAFT_02475: H281DRAFT_02475 - Rieske 2Fe-2S family protein, at 46,238 to 47,542 _02475 Position (kb) 45 46 47Strain fitness (log2 ratio) -1 0 1at 44.636 kb on + strand, within H281DRAFT_02473at 45.146 kb on + strand, within H281DRAFT_02473at 45.147 kb on - strand, within H281DRAFT_02473at 45.661 kb on + strand, within H281DRAFT_02474at 45.896 kb on - strand, within H281DRAFT_02474at 45.896 kb on - strand, within H281DRAFT_02474at 46.290 kb on - strandat 46.290 kb on - strandat 46.311 kb on - strandat 46.463 kb on - strand, within H281DRAFT_02475at 46.544 kb on - strand, within H281DRAFT_02475at 46.572 kb on - strand, within H281DRAFT_02475at 46.572 kb on - strand, within H281DRAFT_02475at 46.606 kb on + strand, within H281DRAFT_02475at 46.681 kb on + strand, within H281DRAFT_02475at 46.682 kb on - strand, within H281DRAFT_02475at 46.844 kb on + strand, within H281DRAFT_02475at 46.912 kb on + strand, within H281DRAFT_02475

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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44,636 + H281DRAFT_02473 0.35 +0.0
45,146 + H281DRAFT_02473 0.79 -0.4
45,147 - H281DRAFT_02473 0.79 -0.6
45,661 + H281DRAFT_02474 0.35 -0.2
45,896 - H281DRAFT_02474 0.65 -0.4
45,896 - H281DRAFT_02474 0.65 -0.1
46,290 - +0.1
46,290 - +0.7
46,311 - +0.7
46,463 - H281DRAFT_02475 0.17 +0.9
46,544 - H281DRAFT_02475 0.23 -0.7
46,572 - H281DRAFT_02475 0.26 +0.7
46,572 - H281DRAFT_02475 0.26 -0.7
46,606 + H281DRAFT_02475 0.28 -0.6
46,681 + H281DRAFT_02475 0.34 +0.7
46,682 - H281DRAFT_02475 0.34 -0.7
46,844 + H281DRAFT_02475 0.46 +0.8
46,912 + H281DRAFT_02475 0.52 -0.2

Or see this region's nucleotide sequence