Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02469 and H281DRAFT_02470 are separated by 54 nucleotides H281DRAFT_02470 and H281DRAFT_02471 are separated by 33 nucleotides H281DRAFT_02471 and H281DRAFT_02472 are separated by 2 nucleotides
H281DRAFT_02469: H281DRAFT_02469 - membrane dipeptidase, at 38,642 to 39,613
_02469
H281DRAFT_02470: H281DRAFT_02470 - Predicted hydrocarbon binding protein, contains 4VR domain, at 39,668 to 40,204
_02470
H281DRAFT_02471: H281DRAFT_02471 - 2,4-dienoyl-CoA reductase, at 40,238 to 42,301
_02471
H281DRAFT_02472: H281DRAFT_02472 - Fe-S oxidoreductase, at 42,304 to 44,217
_02472
Position (kb) 40
41
42
43 Strain fitness (log2 ratio) -1
0
1 at 39.628 kb on + strand at 39.629 kb on - strand at 39.686 kb on - strand at 39.773 kb on - strand, within H281DRAFT_02470 at 39.807 kb on - strand, within H281DRAFT_02470 at 39.833 kb on + strand, within H281DRAFT_02470 at 39.835 kb on + strand, within H281DRAFT_02470 at 39.836 kb on - strand, within H281DRAFT_02470 at 40.047 kb on - strand, within H281DRAFT_02470 at 40.047 kb on - strand, within H281DRAFT_02470 at 40.203 kb on - strand at 40.267 kb on + strand at 40.268 kb on - strand at 40.358 kb on + strand at 40.360 kb on + strand at 40.474 kb on + strand, within H281DRAFT_02471 at 41.294 kb on + strand, within H281DRAFT_02471 at 41.295 kb on - strand, within H281DRAFT_02471 at 41.636 kb on - strand, within H281DRAFT_02471 at 41.902 kb on - strand, within H281DRAFT_02471 at 41.939 kb on + strand, within H281DRAFT_02471 at 41.988 kb on - strand, within H281DRAFT_02471 at 42.155 kb on - strand at 42.422 kb on - strand at 42.422 kb on - strand at 42.566 kb on - strand, within H281DRAFT_02472
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 39,628 + -0.2 39,629 - -1.0 39,686 - +0.9 39,773 - H281DRAFT_02470 0.20 -0.5 39,807 - H281DRAFT_02470 0.26 -0.1 39,833 + H281DRAFT_02470 0.31 -0.3 39,835 + H281DRAFT_02470 0.31 -1.3 39,836 - H281DRAFT_02470 0.31 -1.2 40,047 - H281DRAFT_02470 0.71 -0.3 40,047 - H281DRAFT_02470 0.71 +1.1 40,203 - -0.3 40,267 + +0.0 40,268 - +0.1 40,358 + +0.3 40,360 + -0.2 40,474 + H281DRAFT_02471 0.11 -0.9 41,294 + H281DRAFT_02471 0.51 +0.2 41,295 - H281DRAFT_02471 0.51 -0.3 41,636 - H281DRAFT_02471 0.68 -0.1 41,902 - H281DRAFT_02471 0.81 -1.3 41,939 + H281DRAFT_02471 0.82 +0.2 41,988 - H281DRAFT_02471 0.85 +0.4 42,155 - -0.4 42,422 - +1.0 42,422 - +0.2 42,566 - H281DRAFT_02472 0.14 +0.6
Or see this region's nucleotide sequence