Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02233 and H281DRAFT_02234 are separated by 95 nucleotides H281DRAFT_02234 and H281DRAFT_02235 are separated by 0 nucleotides H281DRAFT_02235 and H281DRAFT_02236 overlap by 11 nucleotides H281DRAFT_02236 and H281DRAFT_02237 overlap by 4 nucleotides
H281DRAFT_02233: H281DRAFT_02233 - tRNA_Phe_GAA, at 377,737 to 377,812
_02233
H281DRAFT_02234: H281DRAFT_02234 - two component transcriptional regulator, Fis family, at 377,908 to 378,600
_02234
H281DRAFT_02235: H281DRAFT_02235 - multi-sensor signal transduction histidine kinase, at 378,601 to 381,015
_02235
H281DRAFT_02236: H281DRAFT_02236 - protein of unknown function (DUF4390), at 381,005 to 381,604
_02236
H281DRAFT_02237: H281DRAFT_02237 - 16S rRNA (cytosine967-C5)-methyltransferase, at 381,601 to 383,040
_02237
Position (kb) 378
379
380
381
382 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 377.614 kb on + strand at 377.653 kb on + strand at 377.653 kb on + strand at 377.654 kb on - strand at 377.656 kb on + strand at 377.657 kb on - strand at 377.657 kb on - strand at 378.649 kb on - strand at 379.133 kb on + strand, within H281DRAFT_02235 at 379.133 kb on + strand, within H281DRAFT_02235 at 379.811 kb on + strand, within H281DRAFT_02235 at 379.949 kb on + strand, within H281DRAFT_02235 at 380.084 kb on + strand, within H281DRAFT_02235 at 380.084 kb on + strand, within H281DRAFT_02235 at 380.084 kb on + strand, within H281DRAFT_02235 at 380.084 kb on + strand, within H281DRAFT_02235 at 380.364 kb on + strand, within H281DRAFT_02235 at 380.393 kb on + strand, within H281DRAFT_02235 at 380.699 kb on + strand, within H281DRAFT_02235 at 380.873 kb on + strand at 380.873 kb on + strand at 381.007 kb on - strand at 381.010 kb on + strand at 381.010 kb on + strand at 381.011 kb on - strand at 381.029 kb on - strand at 381.144 kb on + strand, within H281DRAFT_02236 at 381.403 kb on + strand, within H281DRAFT_02236 at 381.727 kb on + strand at 381.728 kb on - strand at 381.728 kb on - strand at 381.825 kb on + strand, within H281DRAFT_02237 at 381.826 kb on - strand, within H281DRAFT_02237 at 381.826 kb on - strand, within H281DRAFT_02237 at 381.830 kb on + strand, within H281DRAFT_02237 at 381.831 kb on - strand, within H281DRAFT_02237
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 377,614 + +0.4 377,653 + -1.0 377,653 + +0.8 377,654 - +1.8 377,656 + +0.2 377,657 - -0.1 377,657 - +1.2 378,649 - -0.2 379,133 + H281DRAFT_02235 0.22 -0.3 379,133 + H281DRAFT_02235 0.22 -3.4 379,811 + H281DRAFT_02235 0.50 -0.8 379,949 + H281DRAFT_02235 0.56 -3.5 380,084 + H281DRAFT_02235 0.61 -2.9 380,084 + H281DRAFT_02235 0.61 -2.9 380,084 + H281DRAFT_02235 0.61 -2.1 380,084 + H281DRAFT_02235 0.61 -3.4 380,364 + H281DRAFT_02235 0.73 -1.3 380,393 + H281DRAFT_02235 0.74 -2.4 380,699 + H281DRAFT_02235 0.87 -2.9 380,873 + -2.5 380,873 + -1.2 381,007 - +1.8 381,010 + -0.0 381,010 + -0.6 381,011 - +0.3 381,029 - -0.0 381,144 + H281DRAFT_02236 0.23 -1.3 381,403 + H281DRAFT_02236 0.66 -0.6 381,727 + -0.2 381,728 - -0.1 381,728 - +0.4 381,825 + H281DRAFT_02237 0.16 -1.6 381,826 - H281DRAFT_02237 0.16 +1.2 381,826 - H281DRAFT_02237 0.16 -0.1 381,830 + H281DRAFT_02237 0.16 -1.4 381,831 - H281DRAFT_02237 0.16 -0.5
Or see this region's nucleotide sequence