Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02227 and H281DRAFT_02228 are separated by 142 nucleotides H281DRAFT_02228 and H281DRAFT_02229 overlap by 4 nucleotides H281DRAFT_02229 and H281DRAFT_02230 are separated by 203 nucleotides H281DRAFT_02230 and H281DRAFT_02231 are separated by 6 nucleotides
H281DRAFT_02227: H281DRAFT_02227 - cell elongation-specific peptidoglycan biosynthesis regulator RodA, at 372,492 to 373,640
_02227
H281DRAFT_02228: H281DRAFT_02228 - Sel1 repeat-containing protein, at 373,783 to 374,484
_02228
H281DRAFT_02229: H281DRAFT_02229 - 2-dehydro-3-deoxyglucarate aldolase, at 374,481 to 375,263
_02229
H281DRAFT_02230: H281DRAFT_02230 - 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase, at 375,467 to 375,913
_02230
H281DRAFT_02231: H281DRAFT_02231 - 7-carboxy-7-deazaguanine synthase, Cx14CxxC type, at 375,920 to 376,552
_02231
Position (kb) 374
375
376 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 373.679 kb on - strand at 373.836 kb on - strand at 373.836 kb on - strand at 373.883 kb on + strand, within H281DRAFT_02228 at 373.934 kb on + strand, within H281DRAFT_02228 at 373.935 kb on - strand, within H281DRAFT_02228 at 373.953 kb on - strand, within H281DRAFT_02228 at 373.953 kb on - strand, within H281DRAFT_02228 at 373.953 kb on - strand, within H281DRAFT_02228 at 373.965 kb on + strand, within H281DRAFT_02228 at 373.966 kb on - strand, within H281DRAFT_02228 at 374.149 kb on + strand, within H281DRAFT_02228 at 374.150 kb on + strand, within H281DRAFT_02228 at 374.150 kb on + strand, within H281DRAFT_02228 at 374.150 kb on + strand, within H281DRAFT_02228 at 374.150 kb on + strand, within H281DRAFT_02228 at 374.151 kb on - strand, within H281DRAFT_02228 at 374.151 kb on - strand, within H281DRAFT_02228 at 374.151 kb on - strand, within H281DRAFT_02228 at 374.151 kb on - strand, within H281DRAFT_02228 at 374.162 kb on + strand, within H281DRAFT_02228 at 374.163 kb on - strand, within H281DRAFT_02228 at 374.168 kb on + strand, within H281DRAFT_02228 at 374.168 kb on + strand, within H281DRAFT_02228 at 374.168 kb on + strand, within H281DRAFT_02228 at 374.169 kb on - strand, within H281DRAFT_02228 at 374.169 kb on - strand, within H281DRAFT_02228 at 374.169 kb on - strand, within H281DRAFT_02228 at 374.169 kb on - strand, within H281DRAFT_02228 at 374.169 kb on - strand, within H281DRAFT_02228 at 374.169 kb on - strand, within H281DRAFT_02228 at 374.270 kb on + strand, within H281DRAFT_02228 at 374.270 kb on + strand, within H281DRAFT_02228 at 374.271 kb on - strand, within H281DRAFT_02228 at 374.351 kb on + strand, within H281DRAFT_02228 at 374.351 kb on + strand, within H281DRAFT_02228 at 374.352 kb on - strand, within H281DRAFT_02228 at 374.553 kb on - strand at 375.420 kb on + strand at 375.420 kb on + strand at 375.420 kb on + strand at 375.420 kb on + strand at 375.431 kb on + strand at 375.556 kb on - strand, within H281DRAFT_02230 at 375.822 kb on + strand, within H281DRAFT_02230 at 375.823 kb on - strand, within H281DRAFT_02230 at 375.823 kb on - strand, within H281DRAFT_02230 at 375.823 kb on - strand, within H281DRAFT_02230 at 375.823 kb on - strand, within H281DRAFT_02230 at 375.842 kb on - strand, within H281DRAFT_02230 at 375.936 kb on + strand at 375.936 kb on + strand at 375.937 kb on - strand at 375.937 kb on - strand at 375.937 kb on - strand at 375.937 kb on - strand at 375.937 kb on - strand at 376.048 kb on - strand, within H281DRAFT_02231 at 376.244 kb on + strand, within H281DRAFT_02231 at 376.244 kb on + strand, within H281DRAFT_02231
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 373,679 - -1.5 373,836 - -0.7 373,836 - +0.9 373,883 + H281DRAFT_02228 0.14 -0.5 373,934 + H281DRAFT_02228 0.22 -0.6 373,935 - H281DRAFT_02228 0.22 +0.5 373,953 - H281DRAFT_02228 0.24 -0.8 373,953 - H281DRAFT_02228 0.24 -0.4 373,953 - H281DRAFT_02228 0.24 +0.1 373,965 + H281DRAFT_02228 0.26 +2.9 373,966 - H281DRAFT_02228 0.26 -0.5 374,149 + H281DRAFT_02228 0.52 -1.0 374,150 + H281DRAFT_02228 0.52 -0.2 374,150 + H281DRAFT_02228 0.52 +0.7 374,150 + H281DRAFT_02228 0.52 +0.3 374,150 + H281DRAFT_02228 0.52 -0.3 374,151 - H281DRAFT_02228 0.52 +1.4 374,151 - H281DRAFT_02228 0.52 -2.0 374,151 - H281DRAFT_02228 0.52 +0.3 374,151 - H281DRAFT_02228 0.52 -1.0 374,162 + H281DRAFT_02228 0.54 +0.4 374,163 - H281DRAFT_02228 0.54 +0.7 374,168 + H281DRAFT_02228 0.55 -0.9 374,168 + H281DRAFT_02228 0.55 -0.1 374,168 + H281DRAFT_02228 0.55 -0.8 374,169 - H281DRAFT_02228 0.55 -0.1 374,169 - H281DRAFT_02228 0.55 -0.0 374,169 - H281DRAFT_02228 0.55 -0.9 374,169 - H281DRAFT_02228 0.55 +0.3 374,169 - H281DRAFT_02228 0.55 -0.6 374,169 - H281DRAFT_02228 0.55 +0.4 374,270 + H281DRAFT_02228 0.69 -0.8 374,270 + H281DRAFT_02228 0.69 -1.3 374,271 - H281DRAFT_02228 0.70 -0.5 374,351 + H281DRAFT_02228 0.81 -0.3 374,351 + H281DRAFT_02228 0.81 -0.4 374,352 - H281DRAFT_02228 0.81 -0.4 374,553 - -0.7 375,420 + -0.6 375,420 + +0.1 375,420 + -0.9 375,420 + +0.8 375,431 + +0.8 375,556 - H281DRAFT_02230 0.20 -2.4 375,822 + H281DRAFT_02230 0.79 -3.1 375,823 - H281DRAFT_02230 0.80 +1.9 375,823 - H281DRAFT_02230 0.80 -1.6 375,823 - H281DRAFT_02230 0.80 -0.3 375,823 - H281DRAFT_02230 0.80 -0.8 375,842 - H281DRAFT_02230 0.84 -2.3 375,936 + -0.7 375,936 + -0.3 375,937 - -1.3 375,937 - -1.0 375,937 - -1.5 375,937 - -0.3 375,937 - -0.9 376,048 - H281DRAFT_02231 0.20 -2.4 376,244 + H281DRAFT_02231 0.51 -2.0 376,244 + H281DRAFT_02231 0.51 -1.0
Or see this region's nucleotide sequence