Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02129 and H281DRAFT_02130 are separated by 437 nucleotides H281DRAFT_02130 and H281DRAFT_02131 are separated by 877 nucleotides
H281DRAFT_02129: H281DRAFT_02129 - diguanylate cyclase (GGDEF) domain-containing protein, at 263,374 to 264,912
_02129
H281DRAFT_02130: H281DRAFT_02130 - methyl-accepting chemotaxis sensory transducer, at 265,350 to 267,179
_02130
H281DRAFT_02131: H281DRAFT_02131 - hypothetical protein, at 268,057 to 269,271
_02131
Position (kb)
265
266
267
268 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 264.468 kb on - strand, within H281DRAFT_02129 at 264.524 kb on + strand, within H281DRAFT_02129 at 264.525 kb on - strand, within H281DRAFT_02129 at 264.525 kb on - strand, within H281DRAFT_02129 at 264.564 kb on + strand, within H281DRAFT_02129 at 264.564 kb on + strand, within H281DRAFT_02129 at 264.565 kb on - strand, within H281DRAFT_02129 at 264.566 kb on + strand, within H281DRAFT_02129 at 264.567 kb on - strand, within H281DRAFT_02129 at 264.701 kb on - strand, within H281DRAFT_02129 at 264.713 kb on + strand, within H281DRAFT_02129 at 264.714 kb on - strand, within H281DRAFT_02129 at 264.714 kb on - strand, within H281DRAFT_02129 at 264.714 kb on - strand, within H281DRAFT_02129 at 264.714 kb on - strand, within H281DRAFT_02129 at 264.714 kb on - strand, within H281DRAFT_02129 at 264.982 kb on + strand at 264.983 kb on - strand at 264.983 kb on - strand at 265.026 kb on + strand at 265.033 kb on + strand at 265.033 kb on + strand at 265.089 kb on + strand at 265.089 kb on + strand at 265.202 kb on + strand at 265.203 kb on - strand at 265.272 kb on + strand at 265.272 kb on + strand at 265.272 kb on + strand at 265.272 kb on + strand at 265.273 kb on - strand at 265.276 kb on + strand at 265.276 kb on + strand at 265.276 kb on + strand at 265.276 kb on + strand at 265.277 kb on - strand at 265.347 kb on + strand at 265.347 kb on + strand at 265.347 kb on + strand at 265.347 kb on + strand at 265.348 kb on - strand at 265.348 kb on - strand at 265.348 kb on - strand at 265.349 kb on + strand at 265.349 kb on + strand at 265.349 kb on + strand at 265.349 kb on + strand at 265.350 kb on - strand at 265.350 kb on - strand at 265.350 kb on - strand at 265.376 kb on + strand at 265.636 kb on + strand, within H281DRAFT_02130 at 265.637 kb on - strand, within H281DRAFT_02130 at 265.637 kb on - strand, within H281DRAFT_02130 at 265.738 kb on - strand at 265.738 kb on - strand, within H281DRAFT_02130 at 265.782 kb on - strand at 265.860 kb on + strand, within H281DRAFT_02130 at 265.861 kb on - strand, within H281DRAFT_02130 at 265.869 kb on + strand, within H281DRAFT_02130 at 265.869 kb on + strand, within H281DRAFT_02130 at 265.905 kb on + strand, within H281DRAFT_02130 at 265.906 kb on - strand, within H281DRAFT_02130 at 265.918 kb on - strand, within H281DRAFT_02130 at 265.991 kb on - strand, within H281DRAFT_02130 at 266.075 kb on + strand, within H281DRAFT_02130 at 266.075 kb on + strand, within H281DRAFT_02130 at 266.216 kb on + strand, within H281DRAFT_02130 at 266.217 kb on - strand, within H281DRAFT_02130 at 267.054 kb on - strand at 267.217 kb on + strand at 267.217 kb on + strand at 267.217 kb on + strand at 267.217 kb on + strand at 267.397 kb on + strand at 267.397 kb on + strand at 267.398 kb on - strand at 267.478 kb on + strand at 267.512 kb on + strand at 267.513 kb on - strand at 267.513 kb on - strand at 267.513 kb on - strand at 267.513 kb on - strand at 267.691 kb on + strand at 267.691 kb on + strand at 267.692 kb on - strand at 267.692 kb on - strand at 267.886 kb on + strand at 267.886 kb on + strand at 267.887 kb on - strand at 267.887 kb on - strand at 267.954 kb on + strand at 267.955 kb on - strand at 267.955 kb on - strand at 267.955 kb on - strand at 267.955 kb on - strand at 267.973 kb on - strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.979 kb on + strand at 267.980 kb on - strand at 267.980 kb on - strand at 267.980 kb on - strand at 267.982 kb on + strand at 268.056 kb on + strand at 268.056 kb on + strand at 268.056 kb on + strand at 268.056 kb on + strand at 268.056 kb on + strand at 268.057 kb on - strand at 268.057 kb on - strand at 268.086 kb on + strand at 268.086 kb on + strand at 268.086 kb on + strand at 268.108 kb on + strand at 268.108 kb on + strand at 268.158 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 264,468 - H281DRAFT_02129 0.71 -0.8 264,524 + H281DRAFT_02129 0.75 +0.6 264,525 - H281DRAFT_02129 0.75 -0.1 264,525 - H281DRAFT_02129 0.75 -0.2 264,564 + H281DRAFT_02129 0.77 +1.6 264,564 + H281DRAFT_02129 0.77 +0.1 264,565 - H281DRAFT_02129 0.77 -0.8 264,566 + H281DRAFT_02129 0.77 -0.7 264,567 - H281DRAFT_02129 0.78 -0.1 264,701 - H281DRAFT_02129 0.86 -0.9 264,713 + H281DRAFT_02129 0.87 -2.1 264,714 - H281DRAFT_02129 0.87 +0.2 264,714 - H281DRAFT_02129 0.87 +0.6 264,714 - H281DRAFT_02129 0.87 +0.0 264,714 - H281DRAFT_02129 0.87 +0.1 264,714 - H281DRAFT_02129 0.87 +0.1 264,982 + +0.7 264,983 - -0.4 264,983 - -0.7 265,026 + -0.4 265,033 + +0.8 265,033 + +0.9 265,089 + -0.0 265,089 + -1.0 265,202 + +0.3 265,203 - +0.6 265,272 + +0.3 265,272 + +0.1 265,272 + -0.7 265,272 + +0.7 265,273 - -0.2 265,276 + +0.5 265,276 + -0.5 265,276 + +0.2 265,276 + +0.1 265,277 - +0.2 265,347 + -0.4 265,347 + +1.2 265,347 + -1.0 265,347 + +1.4 265,348 - -1.0 265,348 - +0.3 265,348 - -1.1 265,349 + -0.2 265,349 + +0.4 265,349 + +1.1 265,349 + +0.0 265,350 - +0.2 265,350 - -0.9 265,350 - +1.3 265,376 + +0.1 265,636 + H281DRAFT_02130 0.16 -0.2 265,637 - H281DRAFT_02130 0.16 +1.3 265,637 - H281DRAFT_02130 0.16 -0.2 265,738 - -0.7 265,738 - H281DRAFT_02130 0.21 +0.9 265,782 - +1.7 265,860 + H281DRAFT_02130 0.28 -1.3 265,861 - H281DRAFT_02130 0.28 -0.5 265,869 + H281DRAFT_02130 0.28 +2.5 265,869 + H281DRAFT_02130 0.28 +0.4 265,905 + H281DRAFT_02130 0.30 +0.3 265,906 - H281DRAFT_02130 0.30 +0.9 265,918 - H281DRAFT_02130 0.31 +0.4 265,991 - H281DRAFT_02130 0.35 +0.3 266,075 + H281DRAFT_02130 0.40 +1.5 266,075 + H281DRAFT_02130 0.40 +0.2 266,216 + H281DRAFT_02130 0.47 -0.6 266,217 - H281DRAFT_02130 0.47 -0.3 267,054 - +0.3 267,217 + -1.4 267,217 + -0.8 267,217 + -2.6 267,217 + +0.2 267,397 + -0.3 267,397 + +0.6 267,398 - -0.0 267,478 + +0.6 267,512 + -0.0 267,513 - -0.2 267,513 - -0.7 267,513 - +0.8 267,513 - -0.8 267,691 + +0.3 267,691 + +0.3 267,692 - -0.4 267,692 - -0.3 267,886 + +0.5 267,886 + +1.0 267,887 - +0.8 267,887 - -0.4 267,954 + +1.0 267,955 - +0.4 267,955 - -1.5 267,955 - +1.2 267,955 - -0.7 267,973 - -0.6 267,979 + -1.1 267,979 + -0.9 267,979 + +0.5 267,979 + -0.3 267,980 - +0.3 267,980 - -0.3 267,980 - -0.0 267,982 + +1.0 268,056 + +0.2 268,056 + -0.0 268,056 + +0.3 268,056 + +0.9 268,056 + +1.0 268,057 - +0.3 268,057 - -0.9 268,086 + +0.0 268,086 + +0.3 268,086 + -2.3 268,108 + +0.2 268,108 + -0.2 268,158 - +0.3
Or see this region's nucleotide sequence