Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01909 and H281DRAFT_01910 are separated by 305 nucleotides H281DRAFT_01910 and H281DRAFT_01911 are separated by 67 nucleotides H281DRAFT_01911 and H281DRAFT_01912 are separated by 168 nucleotides
H281DRAFT_01909: H281DRAFT_01909 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 21,937 to 23,589
_01909
H281DRAFT_01910: H281DRAFT_01910 - hypothetical protein, at 23,895 to 24,695
_01910
H281DRAFT_01911: H281DRAFT_01911 - single-strand binding protein, at 24,763 to 25,302
_01911
H281DRAFT_01912: H281DRAFT_01912 - Predicted arabinose efflux permease, MFS family, at 25,471 to 26,736
_01912
Position (kb) 23
24
25 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 23.046 kb on - strand, within H281DRAFT_01909 at 23.111 kb on + strand, within H281DRAFT_01909 at 23.111 kb on + strand, within H281DRAFT_01909 at 23.230 kb on - strand, within H281DRAFT_01909 at 23.280 kb on - strand, within H281DRAFT_01909 at 23.280 kb on - strand, within H281DRAFT_01909 at 23.378 kb on + strand at 23.378 kb on + strand, within H281DRAFT_01909 at 23.379 kb on - strand, within H281DRAFT_01909 at 23.379 kb on - strand, within H281DRAFT_01909 at 23.379 kb on - strand, within H281DRAFT_01909 at 23.459 kb on + strand at 23.460 kb on - strand at 23.460 kb on - strand at 23.460 kb on - strand at 23.460 kb on - strand at 23.460 kb on - strand at 23.635 kb on + strand at 23.727 kb on - strand at 23.749 kb on + strand at 23.786 kb on + strand at 23.852 kb on + strand at 23.852 kb on + strand at 23.852 kb on + strand at 23.853 kb on - strand at 23.894 kb on + strand at 23.894 kb on + strand at 23.894 kb on + strand at 23.894 kb on + strand at 23.894 kb on + strand at 23.894 kb on + strand at 23.894 kb on + strand at 23.894 kb on + strand at 23.895 kb on - strand at 23.905 kb on + strand at 23.905 kb on + strand at 24.265 kb on - strand, within H281DRAFT_01910 at 24.340 kb on + strand, within H281DRAFT_01910 at 24.514 kb on + strand, within H281DRAFT_01910 at 24.603 kb on + strand, within H281DRAFT_01910 at 24.603 kb on + strand, within H281DRAFT_01910 at 24.604 kb on - strand, within H281DRAFT_01910 at 24.604 kb on - strand, within H281DRAFT_01910 at 24.604 kb on - strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.623 kb on + strand at 24.623 kb on + strand at 24.624 kb on - strand at 24.624 kb on - strand at 24.624 kb on - strand at 25.446 kb on - strand at 25.446 kb on - strand at 25.518 kb on + strand at 25.519 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 23,046 - H281DRAFT_01909 0.67 +0.1 23,111 + H281DRAFT_01909 0.71 -0.6 23,111 + H281DRAFT_01909 0.71 -0.4 23,230 - H281DRAFT_01909 0.78 -0.1 23,280 - H281DRAFT_01909 0.81 -0.3 23,280 - H281DRAFT_01909 0.81 +0.3 23,378 + +0.3 23,378 + H281DRAFT_01909 0.87 -0.5 23,379 - H281DRAFT_01909 0.87 -0.1 23,379 - H281DRAFT_01909 0.87 +0.3 23,379 - H281DRAFT_01909 0.87 -0.0 23,459 + +0.3 23,460 - +0.3 23,460 - -1.5 23,460 - -0.5 23,460 - +0.4 23,460 - +0.4 23,635 + +1.8 23,727 - +0.9 23,749 + +2.8 23,786 + +0.5 23,852 + -0.9 23,852 + -1.0 23,852 + +0.1 23,853 - +0.5 23,894 + +1.0 23,894 + +0.0 23,894 + -0.0 23,894 + +0.5 23,894 + -0.3 23,894 + -0.1 23,894 + -0.2 23,894 + -0.8 23,895 - -0.5 23,905 + +1.8 23,905 + +0.0 24,265 - H281DRAFT_01910 0.46 -2.2 24,340 + H281DRAFT_01910 0.56 +0.3 24,514 + H281DRAFT_01910 0.77 -0.7 24,603 + H281DRAFT_01910 0.88 +0.0 24,603 + H281DRAFT_01910 0.88 -0.5 24,604 - H281DRAFT_01910 0.89 -0.3 24,604 - H281DRAFT_01910 0.89 -0.2 24,604 - H281DRAFT_01910 0.89 +0.2 24,607 + H281DRAFT_01910 0.89 -0.1 24,607 + H281DRAFT_01910 0.89 +0.3 24,607 + H281DRAFT_01910 0.89 -0.8 24,607 + H281DRAFT_01910 0.89 -0.7 24,607 + H281DRAFT_01910 0.89 -0.6 24,607 + H281DRAFT_01910 0.89 -1.7 24,608 - H281DRAFT_01910 0.89 -0.7 24,608 - H281DRAFT_01910 0.89 +0.1 24,608 - H281DRAFT_01910 0.89 -0.1 24,608 - H281DRAFT_01910 0.89 -0.2 24,623 + -0.6 24,623 + -0.3 24,624 - +0.2 24,624 - +0.2 24,624 - +0.3 25,446 - -0.5 25,446 - -0.5 25,518 + -1.7 25,519 - +1.3
Or see this region's nucleotide sequence