Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01814 and H281DRAFT_01815 overlap by 4 nucleotides H281DRAFT_01815 and H281DRAFT_01816 are separated by 165 nucleotides H281DRAFT_01816 and H281DRAFT_01817 are separated by 204 nucleotides
H281DRAFT_01814: H281DRAFT_01814 - transcriptional regulator, XRE family with cupin sensor, at 715,347 to 715,937
_01814
H281DRAFT_01815: H281DRAFT_01815 - L-amino acid N-acyltransferase YncA, at 715,934 to 716,464
_01815
H281DRAFT_01816: H281DRAFT_01816 - Uncharacterized protein, contains GYD domain, at 716,630 to 716,923
_01816
H281DRAFT_01817: H281DRAFT_01817 - Hemolysin activation/secretion protein, at 717,128 to 718,867
_01817
Position (kb) 716
717 Strain fitness (log2 ratio) -2
-1
0
1
2 at 715.636 kb on + strand, within H281DRAFT_01814 at 715.637 kb on - strand, within H281DRAFT_01814 at 715.663 kb on - strand, within H281DRAFT_01814 at 715.762 kb on + strand at 715.887 kb on + strand at 716.360 kb on + strand, within H281DRAFT_01815 at 716.403 kb on - strand, within H281DRAFT_01815 at 716.587 kb on - strand at 716.587 kb on - strand at 716.632 kb on - strand at 716.647 kb on + strand at 716.648 kb on - strand at 716.715 kb on - strand, within H281DRAFT_01816 at 716.914 kb on - strand at 716.914 kb on - strand at 716.914 kb on - strand at 717.026 kb on + strand at 717.432 kb on + strand, within H281DRAFT_01817 at 717.582 kb on + strand, within H281DRAFT_01817 at 717.721 kb on - strand, within H281DRAFT_01817 at 717.741 kb on - strand, within H281DRAFT_01817 at 717.903 kb on + strand, within H281DRAFT_01817
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 715,636 + H281DRAFT_01814 0.49 -0.7 715,637 - H281DRAFT_01814 0.49 -1.2 715,663 - H281DRAFT_01814 0.53 +0.4 715,762 + +2.5 715,887 + -0.5 716,360 + H281DRAFT_01815 0.80 +0.9 716,403 - H281DRAFT_01815 0.88 -0.7 716,587 - +1.3 716,587 - -0.9 716,632 - -2.2 716,647 + +0.2 716,648 - -0.1 716,715 - H281DRAFT_01816 0.29 -0.3 716,914 - -0.4 716,914 - -0.5 716,914 - -0.5 717,026 + -0.4 717,432 + H281DRAFT_01817 0.17 -1.1 717,582 + H281DRAFT_01817 0.26 +1.0 717,721 - H281DRAFT_01817 0.34 -1.7 717,741 - H281DRAFT_01817 0.35 -2.0 717,903 + H281DRAFT_01817 0.45 +1.6
Or see this region's nucleotide sequence