Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01687

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01686 and H281DRAFT_01687 are separated by 81 nucleotidesH281DRAFT_01687 and H281DRAFT_01688 are separated by 116 nucleotides H281DRAFT_01686: H281DRAFT_01686 - Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains, at 569,292 to 570,188 _01686 H281DRAFT_01687: H281DRAFT_01687 - carbonic anhydrase, at 570,270 to 570,812 _01687 H281DRAFT_01688: H281DRAFT_01688 - aliphatic nitrilase, at 570,929 to 571,915 _01688 Position (kb) 570 571Strain fitness (log2 ratio) -1 0 1at 569.338 kb on + strandat 569.426 kb on - strand, within H281DRAFT_01686at 569.426 kb on - strand, within H281DRAFT_01686at 569.436 kb on - strand, within H281DRAFT_01686at 569.593 kb on + strand, within H281DRAFT_01686at 569.876 kb on + strand, within H281DRAFT_01686at 569.924 kb on - strand, within H281DRAFT_01686at 569.972 kb on - strand, within H281DRAFT_01686at 570.172 kb on + strandat 570.173 kb on - strandat 570.675 kb on + strand, within H281DRAFT_01687at 571.423 kb on - strand, within H281DRAFT_01688at 571.522 kb on - strand, within H281DRAFT_01688at 571.759 kb on - strand, within H281DRAFT_01688

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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569,338 + +0.7
569,426 - H281DRAFT_01686 0.15 -0.4
569,426 - H281DRAFT_01686 0.15 +0.7
569,436 - H281DRAFT_01686 0.16 -0.3
569,593 + H281DRAFT_01686 0.34 +0.4
569,876 + H281DRAFT_01686 0.65 +1.6
569,924 - H281DRAFT_01686 0.70 -1.0
569,972 - H281DRAFT_01686 0.76 +0.2
570,172 + -1.5
570,173 - -0.0
570,675 + H281DRAFT_01687 0.75 +0.3
571,423 - H281DRAFT_01688 0.50 +0.0
571,522 - H281DRAFT_01688 0.60 -0.6
571,759 - H281DRAFT_01688 0.84 +0.6

Or see this region's nucleotide sequence