Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01680 and H281DRAFT_01681 overlap by 1 nucleotides H281DRAFT_01681 and H281DRAFT_01682 are separated by 2 nucleotides H281DRAFT_01682 and H281DRAFT_01683 overlap by 4 nucleotides H281DRAFT_01683 and H281DRAFT_01684 are separated by 194 nucleotides H281DRAFT_01684 and H281DRAFT_01685 are separated by 184 nucleotides
H281DRAFT_01680: H281DRAFT_01680 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 563,788 to 565,011
_01680
H281DRAFT_01681: H281DRAFT_01681 - Acyl dehydratase, at 565,011 to 565,478
_01681
H281DRAFT_01682: H281DRAFT_01682 - Predicted enzyme related to lactoylglutathione lyase, at 565,481 to 565,873
_01682
H281DRAFT_01683: H281DRAFT_01683 - ketopantoate reductase (EC 1.1.1.169), at 565,870 to 566,820
_01683
H281DRAFT_01684: H281DRAFT_01684 - transcriptional regulator, TetR family, at 567,015 to 567,590
_01684
H281DRAFT_01685: H281DRAFT_01685 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 567,775 to 569,184
_01685
Position (kb) 565
566
567 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 565.345 kb on - strand, within H281DRAFT_01681 at 565.405 kb on + strand, within H281DRAFT_01681 at 565.451 kb on - strand at 565.466 kb on + strand at 565.528 kb on + strand, within H281DRAFT_01682 at 565.529 kb on - strand, within H281DRAFT_01682 at 565.529 kb on - strand, within H281DRAFT_01682 at 565.854 kb on + strand at 566.198 kb on + strand, within H281DRAFT_01683 at 566.210 kb on + strand, within H281DRAFT_01683 at 566.210 kb on + strand, within H281DRAFT_01683 at 566.211 kb on - strand, within H281DRAFT_01683 at 566.444 kb on + strand, within H281DRAFT_01683 at 566.444 kb on + strand, within H281DRAFT_01683 at 567.043 kb on + strand at 567.044 kb on - strand at 567.121 kb on + strand, within H281DRAFT_01684 at 567.121 kb on + strand, within H281DRAFT_01684 at 567.122 kb on - strand, within H281DRAFT_01684 at 567.256 kb on + strand, within H281DRAFT_01684 at 567.454 kb on + strand, within H281DRAFT_01684 at 567.454 kb on + strand, within H281DRAFT_01684 at 567.455 kb on - strand, within H281DRAFT_01684 at 567.455 kb on - strand, within H281DRAFT_01684 at 567.500 kb on + strand, within H281DRAFT_01684 at 567.774 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 565,345 - H281DRAFT_01681 0.71 -0.1 565,405 + H281DRAFT_01681 0.84 +1.2 565,451 - -0.3 565,466 + +0.1 565,528 + H281DRAFT_01682 0.12 +1.9 565,529 - H281DRAFT_01682 0.12 -0.1 565,529 - H281DRAFT_01682 0.12 -0.6 565,854 + +0.5 566,198 + H281DRAFT_01683 0.34 +0.0 566,210 + H281DRAFT_01683 0.36 -3.6 566,210 + H281DRAFT_01683 0.36 +0.4 566,211 - H281DRAFT_01683 0.36 -0.1 566,444 + H281DRAFT_01683 0.60 +0.4 566,444 + H281DRAFT_01683 0.60 +0.4 567,043 + -1.3 567,044 - -1.5 567,121 + H281DRAFT_01684 0.18 +0.0 567,121 + H281DRAFT_01684 0.18 -2.0 567,122 - H281DRAFT_01684 0.19 -0.7 567,256 + H281DRAFT_01684 0.42 +0.9 567,454 + H281DRAFT_01684 0.76 -1.9 567,454 + H281DRAFT_01684 0.76 -2.8 567,455 - H281DRAFT_01684 0.76 +1.0 567,455 - H281DRAFT_01684 0.76 -1.8 567,500 + H281DRAFT_01684 0.84 -2.3 567,774 + -0.6
Or see this region's nucleotide sequence