Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01626 and H281DRAFT_01627 overlap by 1 nucleotides H281DRAFT_01627 and H281DRAFT_01628 overlap by 4 nucleotides H281DRAFT_01628 and H281DRAFT_01629 are separated by 75 nucleotides
H281DRAFT_01626: H281DRAFT_01626 - putative spermidine/putrescine transport system permease protein, at 505,254 to 506,180
_01626
H281DRAFT_01627: H281DRAFT_01627 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 506,180 to 507,067
_01627
H281DRAFT_01628: H281DRAFT_01628 - putative spermidine/putrescine transport system ATP-binding protein, at 507,064 to 508,143
_01628
H281DRAFT_01629: H281DRAFT_01629 - putative spermidine/putrescine transport system substrate-binding protein, at 508,219 to 509,388
_01629
Position (kb) 507
508
509 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 506.091 kb on + strand at 506.092 kb on - strand at 506.232 kb on - strand at 506.246 kb on + strand at 506.247 kb on - strand at 506.252 kb on + strand at 506.305 kb on - strand, within H281DRAFT_01627 at 506.458 kb on - strand, within H281DRAFT_01627 at 506.458 kb on - strand, within H281DRAFT_01627 at 506.539 kb on - strand, within H281DRAFT_01627 at 506.608 kb on + strand, within H281DRAFT_01627 at 506.609 kb on - strand, within H281DRAFT_01627 at 506.609 kb on - strand at 506.609 kb on - strand, within H281DRAFT_01627 at 506.609 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.686 kb on - strand, within H281DRAFT_01627 at 506.896 kb on - strand, within H281DRAFT_01627 at 506.961 kb on + strand, within H281DRAFT_01627 at 507.120 kb on + strand at 507.452 kb on + strand, within H281DRAFT_01628 at 507.453 kb on - strand, within H281DRAFT_01628 at 507.453 kb on - strand, within H281DRAFT_01628 at 507.866 kb on + strand, within H281DRAFT_01628 at 507.866 kb on + strand, within H281DRAFT_01628 at 508.221 kb on - strand at 508.421 kb on + strand, within H281DRAFT_01629 at 508.481 kb on + strand, within H281DRAFT_01629 at 508.529 kb on + strand, within H281DRAFT_01629 at 508.529 kb on + strand, within H281DRAFT_01629 at 508.530 kb on - strand, within H281DRAFT_01629 at 508.841 kb on + strand, within H281DRAFT_01629 at 508.842 kb on - strand, within H281DRAFT_01629 at 508.950 kb on + strand, within H281DRAFT_01629 at 508.952 kb on + strand, within H281DRAFT_01629 at 508.953 kb on - strand, within H281DRAFT_01629 at 508.970 kb on + strand, within H281DRAFT_01629 at 509.013 kb on - strand, within H281DRAFT_01629 at 509.013 kb on - strand, within H281DRAFT_01629 at 509.114 kb on - strand, within H281DRAFT_01629 at 509.123 kb on - strand, within H281DRAFT_01629 at 509.123 kb on - strand, within H281DRAFT_01629
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 506,091 + -0.3 506,092 - -0.7 506,232 - +1.2 506,246 + -1.2 506,247 - +0.3 506,252 + +1.1 506,305 - H281DRAFT_01627 0.14 -1.9 506,458 - H281DRAFT_01627 0.31 -0.8 506,458 - H281DRAFT_01627 0.31 +0.0 506,539 - H281DRAFT_01627 0.40 +0.1 506,608 + H281DRAFT_01627 0.48 +0.2 506,609 - H281DRAFT_01627 0.48 -0.4 506,609 - +0.9 506,609 - H281DRAFT_01627 0.48 +0.0 506,609 - H281DRAFT_01627 0.48 -1.6 506,686 - H281DRAFT_01627 0.57 -0.7 506,686 - H281DRAFT_01627 0.57 +0.0 506,686 - H281DRAFT_01627 0.57 -0.3 506,686 - H281DRAFT_01627 0.57 -2.1 506,686 - H281DRAFT_01627 0.57 -3.8 506,896 - H281DRAFT_01627 0.81 +0.2 506,961 + H281DRAFT_01627 0.88 -1.1 507,120 + -0.1 507,452 + H281DRAFT_01628 0.36 -1.0 507,453 - H281DRAFT_01628 0.36 +0.0 507,453 - H281DRAFT_01628 0.36 -1.3 507,866 + H281DRAFT_01628 0.74 -0.4 507,866 + H281DRAFT_01628 0.74 -0.1 508,221 - +0.4 508,421 + H281DRAFT_01629 0.17 +0.8 508,481 + H281DRAFT_01629 0.22 -1.1 508,529 + H281DRAFT_01629 0.26 +0.7 508,529 + H281DRAFT_01629 0.26 +1.6 508,530 - H281DRAFT_01629 0.27 -0.1 508,841 + H281DRAFT_01629 0.53 -0.5 508,842 - H281DRAFT_01629 0.53 -0.5 508,950 + H281DRAFT_01629 0.62 +0.8 508,952 + H281DRAFT_01629 0.63 -1.1 508,953 - H281DRAFT_01629 0.63 -0.5 508,970 + H281DRAFT_01629 0.64 -1.6 509,013 - H281DRAFT_01629 0.68 +0.5 509,013 - H281DRAFT_01629 0.68 +0.6 509,114 - H281DRAFT_01629 0.76 +1.0 509,123 - H281DRAFT_01629 0.77 +0.1 509,123 - H281DRAFT_01629 0.77 -0.1
Or see this region's nucleotide sequence