Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01415

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01414 and H281DRAFT_01415 are separated by 591 nucleotidesH281DRAFT_01415 and H281DRAFT_01416 are separated by 267 nucleotides H281DRAFT_01414: H281DRAFT_01414 - hypothetical protein, at 266,934 to 267,182 _01414 H281DRAFT_01415: H281DRAFT_01415 - hypothetical protein, at 267,774 to 267,989 _01415 H281DRAFT_01416: H281DRAFT_01416 - NADH dehydrogenase, at 268,257 to 269,486 _01416 Position (kb) 267 268Strain fitness (log2 ratio) -1 0 1at 266.831 kb on + strandat 266.929 kb on + strandat 267.007 kb on - strand, within H281DRAFT_01414at 267.207 kb on + strandat 267.444 kb on + strandat 267.445 kb on - strandat 267.449 kb on + strandat 267.450 kb on - strandat 267.685 kb on + strandat 268.109 kb on - strandat 268.408 kb on - strand, within H281DRAFT_01416at 268.490 kb on + strand, within H281DRAFT_01416

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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266,831 + -0.3
266,929 + -0.4
267,007 - H281DRAFT_01414 0.29 -0.1
267,207 + -0.6
267,444 + +0.3
267,445 - -0.4
267,449 + +0.8
267,450 - +0.4
267,685 + -0.1
268,109 - +0.8
268,408 - H281DRAFT_01416 0.12 +0.2
268,490 + H281DRAFT_01416 0.19 -1.0

Or see this region's nucleotide sequence