Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01402

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01400 and H281DRAFT_01401 are separated by 94 nucleotidesH281DRAFT_01401 and H281DRAFT_01402 are separated by 60 nucleotidesH281DRAFT_01402 and H281DRAFT_01403 are separated by 72 nucleotides H281DRAFT_01400: H281DRAFT_01400 - cytochrome b561, at 255,869 to 256,429 _01400 H281DRAFT_01401: H281DRAFT_01401 - Polyisoprenoid-binding protein YceI, at 256,524 to 257,087 _01401 H281DRAFT_01402: H281DRAFT_01402 - Polyisoprenoid-binding protein YceI, at 257,148 to 257,726 _01402 H281DRAFT_01403: H281DRAFT_01403 - hypothetical protein, at 257,799 to 258,785 _01403 Position (kb) 257 258Strain fitness (log2 ratio) -1 0 1at 256.209 kb on - strand, within H281DRAFT_01400at 256.209 kb on - strand, within H281DRAFT_01400at 256.239 kb on - strand, within H281DRAFT_01400at 256.755 kb on + strand, within H281DRAFT_01401at 256.822 kb on - strand, within H281DRAFT_01401at 257.670 kb on + strandat 258.054 kb on - strand, within H281DRAFT_01403at 258.209 kb on - strand, within H281DRAFT_01403at 258.411 kb on + strand, within H281DRAFT_01403

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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256,209 - H281DRAFT_01400 0.61 -1.5
256,209 - H281DRAFT_01400 0.61 -0.1
256,239 - H281DRAFT_01400 0.66 -0.5
256,755 + H281DRAFT_01401 0.41 -1.3
256,822 - H281DRAFT_01401 0.53 -0.7
257,670 + -0.5
258,054 - H281DRAFT_01403 0.26 -0.9
258,209 - H281DRAFT_01403 0.42 +0.4
258,411 + H281DRAFT_01403 0.62 -0.9

Or see this region's nucleotide sequence