Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01391 and H281DRAFT_01392 overlap by 4 nucleotides H281DRAFT_01392 and H281DRAFT_01393 are separated by 16 nucleotides H281DRAFT_01393 and H281DRAFT_01394 overlap by 4 nucleotides
H281DRAFT_01391: H281DRAFT_01391 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 244,155 to 245,549
_01391
H281DRAFT_01392: H281DRAFT_01392 - two component transcriptional regulator, winged helix family, at 245,546 to 246,259
_01392
H281DRAFT_01393: H281DRAFT_01393 - hydrophobic/amphiphilic exporter-1, HAE1 family, at 246,276 to 249,407
_01393
H281DRAFT_01394: H281DRAFT_01394 - RND family efflux transporter, MFP subunit, at 249,404 to 250,612
_01394
Position (kb) 246
247
248
249
250 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 245.384 kb on - strand, within H281DRAFT_01391 at 245.574 kb on + strand at 245.956 kb on - strand, within H281DRAFT_01392 at 246.337 kb on + strand at 246.615 kb on + strand, within H281DRAFT_01393 at 246.841 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.023 kb on - strand, within H281DRAFT_01393 at 247.472 kb on - strand, within H281DRAFT_01393 at 248.248 kb on + strand, within H281DRAFT_01393 at 248.249 kb on - strand, within H281DRAFT_01393 at 248.378 kb on - strand, within H281DRAFT_01393 at 248.797 kb on - strand, within H281DRAFT_01393 at 248.962 kb on + strand, within H281DRAFT_01393 at 248.990 kb on - strand, within H281DRAFT_01393 at 249.379 kb on - strand at 250.007 kb on + strand, within H281DRAFT_01394 at 250.008 kb on - strand, within H281DRAFT_01394 at 250.191 kb on + strand, within H281DRAFT_01394 at 250.232 kb on + strand, within H281DRAFT_01394
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 245,384 - H281DRAFT_01391 0.88 +0.3 245,574 + -0.8 245,956 - H281DRAFT_01392 0.57 -0.5 246,337 + +0.3 246,615 + H281DRAFT_01393 0.11 -0.3 246,841 + H281DRAFT_01393 0.18 -0.0 247,022 + H281DRAFT_01393 0.24 -2.5 247,022 + H281DRAFT_01393 0.24 +0.7 247,022 + H281DRAFT_01393 0.24 +0.4 247,022 + H281DRAFT_01393 0.24 +0.3 247,023 - H281DRAFT_01393 0.24 +0.3 247,472 - H281DRAFT_01393 0.38 +0.6 248,248 + H281DRAFT_01393 0.63 +0.1 248,249 - H281DRAFT_01393 0.63 +3.7 248,378 - H281DRAFT_01393 0.67 -0.7 248,797 - H281DRAFT_01393 0.80 +0.8 248,962 + H281DRAFT_01393 0.86 -1.6 248,990 - H281DRAFT_01393 0.87 +1.0 249,379 - +0.2 250,007 + H281DRAFT_01394 0.50 -1.9 250,008 - H281DRAFT_01394 0.50 +0.7 250,191 + H281DRAFT_01394 0.65 +0.8 250,232 + H281DRAFT_01394 0.68 -0.2
Or see this region's nucleotide sequence