Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01337 and H281DRAFT_01338 are separated by 261 nucleotides H281DRAFT_01338 and H281DRAFT_01339 are separated by 179 nucleotides H281DRAFT_01339 and H281DRAFT_01340 overlap by 4 nucleotides
H281DRAFT_01337: H281DRAFT_01337 - 40-residue YVTN family beta-propeller repeat-containing protein, at 178,840 to 179,961
_01337
H281DRAFT_01338: H281DRAFT_01338 - outer membrane transport energization protein ExbB, at 180,223 to 180,939
_01338
H281DRAFT_01339: H281DRAFT_01339 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 181,119 to 181,889
_01339
H281DRAFT_01340: H281DRAFT_01340 - phosphoglycolate phosphatase, at 181,886 to 182,578
_01340
Position (kb) 180
181 Strain fitness (log2 ratio) -1
0
1 at 179.234 kb on + strand, within H281DRAFT_01337 at 179.235 kb on - strand, within H281DRAFT_01337 at 179.585 kb on + strand, within H281DRAFT_01337 at 179.585 kb on + strand, within H281DRAFT_01337 at 179.585 kb on + strand, within H281DRAFT_01337 at 179.594 kb on + strand, within H281DRAFT_01337 at 179.841 kb on - strand, within H281DRAFT_01337 at 179.841 kb on - strand, within H281DRAFT_01337 at 179.938 kb on + strand at 180.026 kb on + strand at 180.077 kb on + strand at 180.090 kb on - strand at 180.144 kb on + strand at 180.175 kb on - strand at 180.233 kb on - strand at 180.233 kb on - strand at 180.441 kb on + strand, within H281DRAFT_01338 at 180.707 kb on - strand, within H281DRAFT_01338 at 180.904 kb on + strand at 181.709 kb on - strand, within H281DRAFT_01339 at 181.722 kb on + strand, within H281DRAFT_01339
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 179,234 + H281DRAFT_01337 0.35 -0.6 179,235 - H281DRAFT_01337 0.35 +0.2 179,585 + H281DRAFT_01337 0.66 -0.6 179,585 + H281DRAFT_01337 0.66 +0.7 179,585 + H281DRAFT_01337 0.66 +0.3 179,594 + H281DRAFT_01337 0.67 -1.0 179,841 - H281DRAFT_01337 0.89 -0.4 179,841 - H281DRAFT_01337 0.89 -0.5 179,938 + +0.8 180,026 + -0.5 180,077 + -0.6 180,090 - -0.6 180,144 + +0.3 180,175 - -0.4 180,233 - -0.4 180,233 - +0.7 180,441 + H281DRAFT_01338 0.30 +0.7 180,707 - H281DRAFT_01338 0.68 +0.7 180,904 + -0.2 181,709 - H281DRAFT_01339 0.77 +0.2 181,722 + H281DRAFT_01339 0.78 +0.2
Or see this region's nucleotide sequence