Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01336 and H281DRAFT_01337 are separated by 74 nucleotides H281DRAFT_01337 and H281DRAFT_01338 are separated by 261 nucleotides
H281DRAFT_01336: H281DRAFT_01336 - Outer membrane receptor proteins, mostly Fe transport, at 176,402 to 178,765
_01336
H281DRAFT_01337: H281DRAFT_01337 - 40-residue YVTN family beta-propeller repeat-containing protein, at 178,840 to 179,961
_01337
H281DRAFT_01338: H281DRAFT_01338 - outer membrane transport energization protein ExbB, at 180,223 to 180,939
_01338
Position (kb) 178
179
180 Strain fitness (log2 ratio) -1
0
1
2
3 at 177.874 kb on + strand, within H281DRAFT_01336 at 177.874 kb on + strand, within H281DRAFT_01336 at 177.875 kb on - strand, within H281DRAFT_01336 at 177.875 kb on - strand, within H281DRAFT_01336 at 177.875 kb on - strand, within H281DRAFT_01336 at 177.875 kb on - strand, within H281DRAFT_01336 at 177.948 kb on - strand at 178.129 kb on + strand, within H281DRAFT_01336 at 178.130 kb on - strand, within H281DRAFT_01336 at 178.130 kb on - strand, within H281DRAFT_01336 at 178.153 kb on - strand, within H281DRAFT_01336 at 178.153 kb on - strand, within H281DRAFT_01336 at 178.153 kb on - strand, within H281DRAFT_01336 at 178.153 kb on - strand, within H281DRAFT_01336 at 178.254 kb on + strand, within H281DRAFT_01336 at 178.280 kb on + strand, within H281DRAFT_01336 at 178.280 kb on + strand, within H281DRAFT_01336 at 178.286 kb on + strand at 178.287 kb on - strand, within H281DRAFT_01336 at 178.287 kb on - strand, within H281DRAFT_01336 at 178.484 kb on + strand, within H281DRAFT_01336 at 178.485 kb on - strand, within H281DRAFT_01336 at 178.485 kb on - strand, within H281DRAFT_01336 at 178.673 kb on - strand at 178.785 kb on + strand at 178.786 kb on - strand at 178.950 kb on - strand at 179.054 kb on + strand, within H281DRAFT_01337 at 179.129 kb on + strand, within H281DRAFT_01337 at 179.157 kb on + strand, within H281DRAFT_01337 at 179.234 kb on + strand, within H281DRAFT_01337 at 179.235 kb on - strand, within H281DRAFT_01337 at 179.585 kb on + strand, within H281DRAFT_01337 at 179.585 kb on + strand, within H281DRAFT_01337 at 179.585 kb on + strand, within H281DRAFT_01337 at 179.594 kb on + strand, within H281DRAFT_01337 at 179.841 kb on - strand, within H281DRAFT_01337 at 179.841 kb on - strand, within H281DRAFT_01337 at 179.938 kb on + strand at 180.026 kb on + strand at 180.077 kb on + strand at 180.090 kb on - strand at 180.144 kb on + strand at 180.175 kb on - strand at 180.233 kb on - strand at 180.233 kb on - strand at 180.441 kb on + strand, within H281DRAFT_01338 at 180.707 kb on - strand, within H281DRAFT_01338 at 180.904 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 177,874 + H281DRAFT_01336 0.62 -0.8 177,874 + H281DRAFT_01336 0.62 -1.1 177,875 - H281DRAFT_01336 0.62 -0.7 177,875 - H281DRAFT_01336 0.62 +1.4 177,875 - H281DRAFT_01336 0.62 +0.2 177,875 - H281DRAFT_01336 0.62 +0.3 177,948 - +2.4 178,129 + H281DRAFT_01336 0.73 -0.3 178,130 - H281DRAFT_01336 0.73 +0.7 178,130 - H281DRAFT_01336 0.73 -0.8 178,153 - H281DRAFT_01336 0.74 +0.1 178,153 - H281DRAFT_01336 0.74 -0.1 178,153 - H281DRAFT_01336 0.74 +0.6 178,153 - H281DRAFT_01336 0.74 +0.0 178,254 + H281DRAFT_01336 0.78 +2.0 178,280 + H281DRAFT_01336 0.79 -1.7 178,280 + H281DRAFT_01336 0.79 -0.4 178,286 + +3.1 178,287 - H281DRAFT_01336 0.80 +0.0 178,287 - H281DRAFT_01336 0.80 -1.2 178,484 + H281DRAFT_01336 0.88 -1.2 178,485 - H281DRAFT_01336 0.88 +0.4 178,485 - H281DRAFT_01336 0.88 +0.7 178,673 - +1.0 178,785 + +0.5 178,786 - -0.2 178,950 - -0.2 179,054 + H281DRAFT_01337 0.19 -0.4 179,129 + H281DRAFT_01337 0.26 +0.6 179,157 + H281DRAFT_01337 0.28 +0.4 179,234 + H281DRAFT_01337 0.35 -0.6 179,235 - H281DRAFT_01337 0.35 +0.2 179,585 + H281DRAFT_01337 0.66 -0.6 179,585 + H281DRAFT_01337 0.66 +0.7 179,585 + H281DRAFT_01337 0.66 +0.3 179,594 + H281DRAFT_01337 0.67 -1.0 179,841 - H281DRAFT_01337 0.89 -0.4 179,841 - H281DRAFT_01337 0.89 -0.5 179,938 + +0.8 180,026 + -0.5 180,077 + -0.6 180,090 - -0.6 180,144 + +0.3 180,175 - -0.4 180,233 - -0.4 180,233 - +0.7 180,441 + H281DRAFT_01338 0.30 +0.7 180,707 - H281DRAFT_01338 0.68 +0.7 180,904 + -0.2
Or see this region's nucleotide sequence