Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01316

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01315 and H281DRAFT_01316 are separated by 114 nucleotidesH281DRAFT_01316 and H281DRAFT_01317 are separated by 109 nucleotides H281DRAFT_01315: H281DRAFT_01315 - probable Rubsico expression protein CbbX, at 155,249 to 156,337 _01315 H281DRAFT_01316: H281DRAFT_01316 - ribulose 1,5-bisphosphate carboxylase small subunit, at 156,452 to 156,880 _01316 H281DRAFT_01317: H281DRAFT_01317 - ribulose 1,5-bisphosphate carboxylase large subunit, at 156,990 to 158,489 _01317 Position (kb) 156 157Strain fitness (log2 ratio) -1 0 1 2 3at 155.920 kb on - strand, within H281DRAFT_01315at 155.920 kb on - strand, within H281DRAFT_01315at 155.920 kb on - strand, within H281DRAFT_01315at 155.920 kb on - strand, within H281DRAFT_01315at 155.973 kb on + strand, within H281DRAFT_01315at 156.053 kb on - strand, within H281DRAFT_01315at 156.433 kb on + strandat 156.886 kb on - strandat 157.408 kb on + strand, within H281DRAFT_01317at 157.543 kb on + strand, within H281DRAFT_01317at 157.544 kb on - strand, within H281DRAFT_01317at 157.690 kb on + strand, within H281DRAFT_01317at 157.691 kb on - strand, within H281DRAFT_01317at 157.726 kb on + strand, within H281DRAFT_01317

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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155,920 - H281DRAFT_01315 0.62 +1.5
155,920 - H281DRAFT_01315 0.62 +1.0
155,920 - H281DRAFT_01315 0.62 +1.7
155,920 - H281DRAFT_01315 0.62 +1.0
155,973 + H281DRAFT_01315 0.66 -0.1
156,053 - H281DRAFT_01315 0.74 +1.8
156,433 + +0.4
156,886 - +3.0
157,408 + H281DRAFT_01317 0.28 -0.3
157,543 + H281DRAFT_01317 0.37 +1.4
157,544 - H281DRAFT_01317 0.37 +1.7
157,690 + H281DRAFT_01317 0.47 -0.1
157,691 - H281DRAFT_01317 0.47 +1.7
157,726 + H281DRAFT_01317 0.49 +0.4

Or see this region's nucleotide sequence