Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01168

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntH281DRAFT_01168 and H281DRAFT_01169 are separated by 51 nucleotides H281DRAFT_01168: H281DRAFT_01168 - electron transfer flavoprotein beta subunit, at 3 to 653 _01168 H281DRAFT_01169: H281DRAFT_01169 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 705 to 1,907 _01169 Position (kb) 0 1Strain fitness (log2 ratio) -1 0 1at 0.674 kb on + strandat 1.326 kb on + strand, within H281DRAFT_01169at 1.498 kb on + strand, within H281DRAFT_01169at 1.552 kb on + strand, within H281DRAFT_01169at 1.556 kb on + strand, within H281DRAFT_01169at 1.588 kb on + strand, within H281DRAFT_01169

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
remove
674 + -0.8
1,326 + H281DRAFT_01169 0.52 -0.2
1,498 + H281DRAFT_01169 0.66 -1.0
1,552 + H281DRAFT_01169 0.70 -0.0
1,556 + H281DRAFT_01169 0.71 -0.0
1,588 + H281DRAFT_01169 0.73 +0.2

Or see this region's nucleotide sequence