Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01142

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01141 and H281DRAFT_01142 overlap by 4 nucleotidesH281DRAFT_01142 and H281DRAFT_01143 overlap by 8 nucleotides H281DRAFT_01141: H281DRAFT_01141 - xanthine dehydrogenase, molybdenum binding subunit apoprotein, at 1,287,592 to 1,290,654 _01141 H281DRAFT_01142: H281DRAFT_01142 - 2,5-furandicarboxylate decarboxylase 2, at 1,290,651 to 1,291,307 _01142 H281DRAFT_01143: H281DRAFT_01143 - 2,5-furandicarboxylate decarboxylase 1, at 1,291,300 to 1,292,784 _01143 Position (kb) 1290 1291 1292Strain fitness (log2 ratio) -1 0 1at 1290.031 kb on - strand, within H281DRAFT_01141at 1291.069 kb on + strand, within H281DRAFT_01142at 1291.088 kb on + strand, within H281DRAFT_01142at 1291.323 kb on - strandat 1291.472 kb on + strand, within H281DRAFT_01143at 1291.653 kb on - strand, within H281DRAFT_01143at 1291.653 kb on - strand, within H281DRAFT_01143at 1292.023 kb on + strand, within H281DRAFT_01143at 1292.029 kb on + strand, within H281DRAFT_01143at 1292.030 kb on - strand, within H281DRAFT_01143at 1292.030 kb on - strand, within H281DRAFT_01143

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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1,290,031 - H281DRAFT_01141 0.80 +0.5
1,291,069 + H281DRAFT_01142 0.64 -1.0
1,291,088 + H281DRAFT_01142 0.67 -1.1
1,291,323 - -1.2
1,291,472 + H281DRAFT_01143 0.12 +0.3
1,291,653 - H281DRAFT_01143 0.24 +0.2
1,291,653 - H281DRAFT_01143 0.24 -0.3
1,292,023 + H281DRAFT_01143 0.49 +0.4
1,292,029 + H281DRAFT_01143 0.49 +0.6
1,292,030 - H281DRAFT_01143 0.49 +0.4
1,292,030 - H281DRAFT_01143 0.49 +0.7

Or see this region's nucleotide sequence