Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01123 and H281DRAFT_01124 are separated by 86 nucleotides H281DRAFT_01124 and H281DRAFT_01125 are separated by 66 nucleotides H281DRAFT_01125 and H281DRAFT_01126 overlap by 4 nucleotides H281DRAFT_01126 and H281DRAFT_01127 overlap by 4 nucleotides
H281DRAFT_01123: H281DRAFT_01123 - transcriptional regulator, LysR family, at 1,265,837 to 1,266,736
_01123
H281DRAFT_01124: H281DRAFT_01124 - hypothetical protein, at 1,266,823 to 1,267,077
_01124
H281DRAFT_01125: H281DRAFT_01125 - protein of unknown function (DUF2760), at 1,267,144 to 1,267,707
_01125
H281DRAFT_01126: H281DRAFT_01126 - Molecular chaperone DnaK (HSP70), at 1,267,704 to 1,269,563
_01126
H281DRAFT_01127: H281DRAFT_01127 - Molecular chaperone, at 1,269,560 to 1,272,529
_01127
Position (kb)
1267
1268
1269
1270 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1266.780 kb on + strand at 1266.836 kb on + strand at 1266.837 kb on - strand at 1266.978 kb on + strand, within H281DRAFT_01124 at 1267.144 kb on - strand at 1267.144 kb on - strand at 1267.489 kb on - strand, within H281DRAFT_01125 at 1267.600 kb on - strand, within H281DRAFT_01125 at 1267.704 kb on - strand at 1267.704 kb on - strand at 1267.878 kb on + strand at 1268.300 kb on + strand at 1268.301 kb on - strand, within H281DRAFT_01126 at 1268.301 kb on - strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.572 kb on - strand, within H281DRAFT_01126 at 1268.572 kb on - strand, within H281DRAFT_01126 at 1268.572 kb on - strand, within H281DRAFT_01126 at 1268.799 kb on + strand, within H281DRAFT_01126 at 1269.091 kb on - strand, within H281DRAFT_01126 at 1269.093 kb on + strand, within H281DRAFT_01126 at 1269.093 kb on + strand, within H281DRAFT_01126 at 1269.093 kb on + strand, within H281DRAFT_01126 at 1269.151 kb on - strand, within H281DRAFT_01126 at 1269.153 kb on + strand, within H281DRAFT_01126 at 1269.153 kb on + strand, within H281DRAFT_01126 at 1269.154 kb on - strand at 1269.154 kb on - strand, within H281DRAFT_01126 at 1269.578 kb on + strand at 1269.723 kb on - strand at 1269.895 kb on - strand, within H281DRAFT_01127 at 1269.895 kb on - strand, within H281DRAFT_01127 at 1270.294 kb on + strand, within H281DRAFT_01127 at 1270.540 kb on + strand, within H281DRAFT_01127
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,266,780 + +0.5 1,266,836 + -0.1 1,266,837 - +0.4 1,266,978 + H281DRAFT_01124 0.61 +0.7 1,267,144 - -0.1 1,267,144 - +0.2 1,267,489 - H281DRAFT_01125 0.61 -1.8 1,267,600 - H281DRAFT_01125 0.81 -0.5 1,267,704 - -0.8 1,267,704 - -2.3 1,267,878 + -1.1 1,268,300 + +3.5 1,268,301 - H281DRAFT_01126 0.32 +0.2 1,268,301 - H281DRAFT_01126 0.32 -0.3 1,268,571 + H281DRAFT_01126 0.47 -0.3 1,268,571 + H281DRAFT_01126 0.47 -3.1 1,268,571 + H281DRAFT_01126 0.47 +0.2 1,268,571 + H281DRAFT_01126 0.47 -0.7 1,268,571 + H281DRAFT_01126 0.47 +0.4 1,268,572 - H281DRAFT_01126 0.47 -0.3 1,268,572 - H281DRAFT_01126 0.47 +1.0 1,268,572 - H281DRAFT_01126 0.47 -0.9 1,268,799 + H281DRAFT_01126 0.59 +2.7 1,269,091 - H281DRAFT_01126 0.75 -0.2 1,269,093 + H281DRAFT_01126 0.75 +1.2 1,269,093 + H281DRAFT_01126 0.75 -0.7 1,269,093 + H281DRAFT_01126 0.75 -1.5 1,269,151 - H281DRAFT_01126 0.78 +1.0 1,269,153 + H281DRAFT_01126 0.78 +0.6 1,269,153 + H281DRAFT_01126 0.78 +0.4 1,269,154 - +0.7 1,269,154 - H281DRAFT_01126 0.78 +0.0 1,269,578 + +0.3 1,269,723 - -2.0 1,269,895 - H281DRAFT_01127 0.11 -2.0 1,269,895 - H281DRAFT_01127 0.11 -1.0 1,270,294 + H281DRAFT_01127 0.25 -0.9 1,270,540 + H281DRAFT_01127 0.33 -0.3
Or see this region's nucleotide sequence