Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00946

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00945 and H281DRAFT_00946 are separated by 56 nucleotidesH281DRAFT_00946 and H281DRAFT_00947 overlap by 1 nucleotides H281DRAFT_00945: H281DRAFT_00945 - UDP-glucose dehydrogenase, at 1,051,154 to 1,052,602 _00945 H281DRAFT_00946: H281DRAFT_00946 - protein-tyrosine phosphatase, at 1,052,659 to 1,053,114 _00946 H281DRAFT_00947: H281DRAFT_00947 - polysaccharide export outer membrane protein, at 1,053,114 to 1,054,379 _00947 Position (kb) 1052 1053 1054Strain fitness (log2 ratio) -1 0 1 2at 1051.727 kb on + strand, within H281DRAFT_00945at 1051.728 kb on - strand, within H281DRAFT_00945at 1051.763 kb on + strand, within H281DRAFT_00945at 1051.796 kb on + strand, within H281DRAFT_00945at 1051.797 kb on - strand, within H281DRAFT_00945at 1051.832 kb on + strand, within H281DRAFT_00945at 1052.153 kb on - strand, within H281DRAFT_00945at 1052.358 kb on + strand, within H281DRAFT_00945at 1052.454 kb on - strand, within H281DRAFT_00945at 1052.872 kb on + strand, within H281DRAFT_00946at 1052.873 kb on - strand, within H281DRAFT_00946at 1053.128 kb on + strandat 1053.142 kb on - strandat 1053.334 kb on - strand, within H281DRAFT_00947at 1053.441 kb on + strand, within H281DRAFT_00947at 1053.646 kb on - strand, within H281DRAFT_00947at 1053.731 kb on + strand, within H281DRAFT_00947at 1053.930 kb on + strand, within H281DRAFT_00947

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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1,051,727 + H281DRAFT_00945 0.40 -0.1
1,051,728 - H281DRAFT_00945 0.40 -0.4
1,051,763 + H281DRAFT_00945 0.42 +0.7
1,051,796 + H281DRAFT_00945 0.44 +0.0
1,051,797 - H281DRAFT_00945 0.44 -0.1
1,051,832 + H281DRAFT_00945 0.47 -1.5
1,052,153 - H281DRAFT_00945 0.69 +0.9
1,052,358 + H281DRAFT_00945 0.83 -0.5
1,052,454 - H281DRAFT_00945 0.90 +1.1
1,052,872 + H281DRAFT_00946 0.47 +0.2
1,052,873 - H281DRAFT_00946 0.47 +1.2
1,053,128 + +0.7
1,053,142 - -0.3
1,053,334 - H281DRAFT_00947 0.17 +2.0
1,053,441 + H281DRAFT_00947 0.26 +0.1
1,053,646 - H281DRAFT_00947 0.42 -0.8
1,053,731 + H281DRAFT_00947 0.49 -0.2
1,053,930 + H281DRAFT_00947 0.64 -0.5

Or see this region's nucleotide sequence