Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00934 and H281DRAFT_00935 are separated by 212 nucleotides H281DRAFT_00935 and H281DRAFT_00936 are separated by 31 nucleotides
H281DRAFT_00934: H281DRAFT_00934 - Small-conductance mechanosensitive channel, at 1,036,913 to 1,038,148
_00934
H281DRAFT_00935: H281DRAFT_00935 - trehalose 6-phosphate synthase, at 1,038,361 to 1,039,773
_00935
H281DRAFT_00936: H281DRAFT_00936 - Predicted ATPase, at 1,039,805 to 1,041,037
_00936
Position (kb)
1038
1039
1040 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1037.600 kb on + strand, within H281DRAFT_00934 at 1037.600 kb on + strand, within H281DRAFT_00934 at 1037.600 kb on + strand, within H281DRAFT_00934 at 1037.601 kb on - strand, within H281DRAFT_00934 at 1037.601 kb on - strand, within H281DRAFT_00934 at 1037.952 kb on - strand, within H281DRAFT_00934 at 1038.146 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.242 kb on - strand at 1038.242 kb on - strand at 1038.242 kb on - strand at 1038.247 kb on + strand at 1038.247 kb on + strand at 1038.248 kb on - strand at 1038.248 kb on - strand at 1038.355 kb on - strand at 1038.355 kb on - strand at 1038.355 kb on - strand at 1038.595 kb on - strand at 1038.596 kb on - strand, within H281DRAFT_00935 at 1038.599 kb on - strand, within H281DRAFT_00935 at 1038.677 kb on - strand, within H281DRAFT_00935 at 1038.763 kb on + strand, within H281DRAFT_00935 at 1038.764 kb on - strand, within H281DRAFT_00935 at 1038.958 kb on + strand, within H281DRAFT_00935 at 1038.958 kb on + strand, within H281DRAFT_00935 at 1038.959 kb on - strand, within H281DRAFT_00935 at 1038.959 kb on - strand, within H281DRAFT_00935 at 1039.288 kb on - strand, within H281DRAFT_00935 at 1039.288 kb on - strand, within H281DRAFT_00935 at 1039.291 kb on + strand, within H281DRAFT_00935 at 1039.345 kb on + strand, within H281DRAFT_00935 at 1039.346 kb on - strand, within H281DRAFT_00935 at 1039.346 kb on - strand, within H281DRAFT_00935 at 1039.360 kb on + strand, within H281DRAFT_00935 at 1039.390 kb on + strand, within H281DRAFT_00935 at 1039.390 kb on + strand, within H281DRAFT_00935 at 1039.484 kb on - strand, within H281DRAFT_00935 at 1039.771 kb on + strand at 1039.858 kb on - strand at 1040.190 kb on - strand, within H281DRAFT_00936 at 1040.468 kb on + strand, within H281DRAFT_00936 at 1040.468 kb on + strand, within H281DRAFT_00936 at 1040.469 kb on - strand, within H281DRAFT_00936 at 1040.469 kb on - strand, within H281DRAFT_00936 at 1040.747 kb on + strand, within H281DRAFT_00936 at 1040.748 kb on - strand, within H281DRAFT_00936 at 1040.748 kb on - strand, within H281DRAFT_00936 at 1040.751 kb on + strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,037,600 + H281DRAFT_00934 0.56 +0.3 1,037,600 + H281DRAFT_00934 0.56 +0.7 1,037,600 + H281DRAFT_00934 0.56 +0.2 1,037,601 - H281DRAFT_00934 0.56 +0.1 1,037,601 - H281DRAFT_00934 0.56 +0.9 1,037,952 - H281DRAFT_00934 0.84 -0.8 1,038,146 + -0.1 1,038,241 + -1.6 1,038,241 + +0.0 1,038,241 + -0.8 1,038,241 + -0.4 1,038,241 + -0.4 1,038,241 + -2.6 1,038,242 - +1.2 1,038,242 - -0.6 1,038,242 - +0.2 1,038,247 + +0.0 1,038,247 + +0.1 1,038,248 - +0.3 1,038,248 - -0.1 1,038,355 - +1.0 1,038,355 - -0.4 1,038,355 - -0.1 1,038,595 - -1.3 1,038,596 - H281DRAFT_00935 0.17 -0.7 1,038,599 - H281DRAFT_00935 0.17 -0.2 1,038,677 - H281DRAFT_00935 0.22 -0.5 1,038,763 + H281DRAFT_00935 0.28 -1.7 1,038,764 - H281DRAFT_00935 0.29 +0.7 1,038,958 + H281DRAFT_00935 0.42 +0.1 1,038,958 + H281DRAFT_00935 0.42 +1.4 1,038,959 - H281DRAFT_00935 0.42 -1.3 1,038,959 - H281DRAFT_00935 0.42 -0.6 1,039,288 - H281DRAFT_00935 0.66 +1.2 1,039,288 - H281DRAFT_00935 0.66 -0.1 1,039,291 + H281DRAFT_00935 0.66 +0.2 1,039,345 + H281DRAFT_00935 0.70 +0.4 1,039,346 - H281DRAFT_00935 0.70 +0.3 1,039,346 - H281DRAFT_00935 0.70 -2.2 1,039,360 + H281DRAFT_00935 0.71 -0.5 1,039,390 + H281DRAFT_00935 0.73 +0.2 1,039,390 + H281DRAFT_00935 0.73 -0.3 1,039,484 - H281DRAFT_00935 0.79 -1.8 1,039,771 + +1.1 1,039,858 - +0.6 1,040,190 - H281DRAFT_00936 0.31 -1.0 1,040,468 + H281DRAFT_00936 0.54 +0.4 1,040,468 + H281DRAFT_00936 0.54 -0.4 1,040,469 - H281DRAFT_00936 0.54 +0.0 1,040,469 - H281DRAFT_00936 0.54 -1.3 1,040,747 + H281DRAFT_00936 0.76 -0.9 1,040,748 - H281DRAFT_00936 0.76 +0.2 1,040,748 - H281DRAFT_00936 0.76 -0.0 1,040,751 + H281DRAFT_00936 0.77 -1.3 1,040,752 - H281DRAFT_00936 0.77 +2.6 1,040,752 - H281DRAFT_00936 0.77 -0.4 1,040,752 - H281DRAFT_00936 0.77 +0.3 1,040,752 - H281DRAFT_00936 0.77 -0.6 1,040,752 - H281DRAFT_00936 0.77 +0.7
Or see this region's nucleotide sequence