Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00914 and H281DRAFT_00915 are separated by 245 nucleotides H281DRAFT_00915 and H281DRAFT_00916 are separated by 183 nucleotides
H281DRAFT_00914: H281DRAFT_00914 - Uncharacterized conserved protein YdiU, UPF0061 family, at 1,015,146 to 1,016,702
_00914
H281DRAFT_00915: H281DRAFT_00915 - fatty-acyl-CoA synthase, at 1,016,948 to 1,018,633
_00915
H281DRAFT_00916: H281DRAFT_00916 - short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase, at 1,018,817 to 1,020,901
_00916
Position (kb)
1016
1017
1018
1019 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1016.313 kb on + strand, within H281DRAFT_00914 at 1016.313 kb on + strand, within H281DRAFT_00914 at 1016.314 kb on - strand, within H281DRAFT_00914 at 1016.314 kb on - strand, within H281DRAFT_00914 at 1016.417 kb on - strand, within H281DRAFT_00914 at 1016.429 kb on - strand, within H281DRAFT_00914 at 1016.462 kb on + strand, within H281DRAFT_00914 at 1016.462 kb on + strand, within H281DRAFT_00914 at 1016.462 kb on + strand, within H281DRAFT_00914 at 1016.463 kb on - strand, within H281DRAFT_00914 at 1016.639 kb on + strand at 1016.639 kb on + strand at 1016.718 kb on - strand at 1016.718 kb on - strand at 1016.728 kb on - strand at 1016.732 kb on + strand at 1016.732 kb on + strand at 1016.733 kb on - strand at 1016.733 kb on - strand at 1016.733 kb on - strand at 1016.802 kb on + strand at 1016.803 kb on - strand at 1016.803 kb on - strand at 1016.803 kb on - strand at 1016.803 kb on - strand at 1017.078 kb on - strand at 1017.083 kb on + strand at 1017.083 kb on + strand at 1017.084 kb on - strand at 1017.084 kb on - strand at 1017.200 kb on + strand, within H281DRAFT_00915 at 1017.201 kb on - strand, within H281DRAFT_00915 at 1017.201 kb on - strand, within H281DRAFT_00915 at 1017.272 kb on + strand, within H281DRAFT_00915 at 1017.273 kb on - strand, within H281DRAFT_00915 at 1017.273 kb on - strand, within H281DRAFT_00915 at 1017.273 kb on - strand, within H281DRAFT_00915 at 1017.299 kb on + strand, within H281DRAFT_00915 at 1017.300 kb on - strand, within H281DRAFT_00915 at 1017.300 kb on - strand, within H281DRAFT_00915 at 1017.300 kb on - strand, within H281DRAFT_00915 at 1017.429 kb on - strand, within H281DRAFT_00915 at 1017.498 kb on - strand, within H281DRAFT_00915 at 1017.498 kb on - strand, within H281DRAFT_00915 at 1017.508 kb on + strand, within H281DRAFT_00915 at 1017.508 kb on + strand, within H281DRAFT_00915 at 1017.508 kb on + strand, within H281DRAFT_00915 at 1017.509 kb on - strand, within H281DRAFT_00915 at 1017.546 kb on - strand, within H281DRAFT_00915 at 1017.640 kb on + strand, within H281DRAFT_00915 at 1017.767 kb on + strand, within H281DRAFT_00915 at 1017.767 kb on + strand, within H281DRAFT_00915 at 1017.810 kb on - strand, within H281DRAFT_00915 at 1017.810 kb on - strand, within H281DRAFT_00915 at 1017.908 kb on + strand, within H281DRAFT_00915 at 1017.915 kb on + strand, within H281DRAFT_00915 at 1017.915 kb on + strand, within H281DRAFT_00915 at 1018.046 kb on + strand, within H281DRAFT_00915 at 1018.058 kb on - strand, within H281DRAFT_00915 at 1018.121 kb on + strand, within H281DRAFT_00915 at 1018.121 kb on + strand, within H281DRAFT_00915 at 1018.122 kb on - strand, within H281DRAFT_00915 at 1018.214 kb on - strand, within H281DRAFT_00915 at 1018.442 kb on + strand, within H281DRAFT_00915 at 1018.829 kb on + strand at 1019.139 kb on + strand, within H281DRAFT_00916 at 1019.471 kb on - strand, within H281DRAFT_00916 at 1019.471 kb on - strand, within H281DRAFT_00916
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,016,313 + H281DRAFT_00914 0.75 -0.6 1,016,313 + H281DRAFT_00914 0.75 -1.8 1,016,314 - H281DRAFT_00914 0.75 +0.7 1,016,314 - H281DRAFT_00914 0.75 +0.3 1,016,417 - H281DRAFT_00914 0.82 -0.6 1,016,429 - H281DRAFT_00914 0.82 -0.5 1,016,462 + H281DRAFT_00914 0.85 +0.7 1,016,462 + H281DRAFT_00914 0.85 +0.7 1,016,462 + H281DRAFT_00914 0.85 -1.7 1,016,463 - H281DRAFT_00914 0.85 -1.6 1,016,639 + -1.1 1,016,639 + +2.3 1,016,718 - +1.4 1,016,718 - -0.0 1,016,728 - +1.0 1,016,732 + -0.8 1,016,732 + +0.1 1,016,733 - +0.9 1,016,733 - +0.4 1,016,733 - -0.1 1,016,802 + -0.5 1,016,803 - +0.7 1,016,803 - -0.7 1,016,803 - -0.0 1,016,803 - -0.2 1,017,078 - +0.1 1,017,083 + +0.5 1,017,083 + -0.5 1,017,084 - +0.4 1,017,084 - -0.6 1,017,200 + H281DRAFT_00915 0.15 -1.4 1,017,201 - H281DRAFT_00915 0.15 -0.3 1,017,201 - H281DRAFT_00915 0.15 -0.6 1,017,272 + H281DRAFT_00915 0.19 +0.3 1,017,273 - H281DRAFT_00915 0.19 -0.3 1,017,273 - H281DRAFT_00915 0.19 +0.5 1,017,273 - H281DRAFT_00915 0.19 +2.7 1,017,299 + H281DRAFT_00915 0.21 -0.7 1,017,300 - H281DRAFT_00915 0.21 -0.3 1,017,300 - H281DRAFT_00915 0.21 +0.2 1,017,300 - H281DRAFT_00915 0.21 +1.0 1,017,429 - H281DRAFT_00915 0.29 -0.1 1,017,498 - H281DRAFT_00915 0.33 -0.6 1,017,498 - H281DRAFT_00915 0.33 +1.3 1,017,508 + H281DRAFT_00915 0.33 -0.3 1,017,508 + H281DRAFT_00915 0.33 -0.4 1,017,508 + H281DRAFT_00915 0.33 -0.1 1,017,509 - H281DRAFT_00915 0.33 -0.1 1,017,546 - H281DRAFT_00915 0.35 +0.3 1,017,640 + H281DRAFT_00915 0.41 -1.0 1,017,767 + H281DRAFT_00915 0.49 -0.1 1,017,767 + H281DRAFT_00915 0.49 -0.3 1,017,810 - H281DRAFT_00915 0.51 +1.1 1,017,810 - H281DRAFT_00915 0.51 +0.6 1,017,908 + H281DRAFT_00915 0.57 +0.2 1,017,915 + H281DRAFT_00915 0.57 -0.1 1,017,915 + H281DRAFT_00915 0.57 +0.9 1,018,046 + H281DRAFT_00915 0.65 -0.2 1,018,058 - H281DRAFT_00915 0.66 +0.8 1,018,121 + H281DRAFT_00915 0.70 +0.6 1,018,121 + H281DRAFT_00915 0.70 +0.6 1,018,122 - H281DRAFT_00915 0.70 -0.5 1,018,214 - H281DRAFT_00915 0.75 +0.2 1,018,442 + H281DRAFT_00915 0.89 +0.5 1,018,829 + +0.5 1,019,139 + H281DRAFT_00916 0.15 +0.5 1,019,471 - H281DRAFT_00916 0.31 +0.3 1,019,471 - H281DRAFT_00916 0.31 -0.0
Or see this region's nucleotide sequence