Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00782

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00781 and H281DRAFT_00782 are separated by 79 nucleotidesH281DRAFT_00782 and H281DRAFT_00783 are separated by 22 nucleotides H281DRAFT_00781: H281DRAFT_00781 - sulfate transport system ATP-binding protein, at 867,485 to 868,543 _00781 H281DRAFT_00782: H281DRAFT_00782 - transcriptional regulator, LysR family, at 868,623 to 869,549 _00782 H281DRAFT_00783: H281DRAFT_00783 - L-asparaginase, at 869,572 to 870,657 _00783 Position (kb) 868 869 870Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 867.748 kb on + strand, within H281DRAFT_00781at 867.916 kb on + strand, within H281DRAFT_00781at 868.274 kb on - strand, within H281DRAFT_00781at 868.304 kb on + strand, within H281DRAFT_00781at 868.304 kb on + strand, within H281DRAFT_00781at 868.308 kb on + strand, within H281DRAFT_00781at 868.308 kb on + strand, within H281DRAFT_00781at 868.309 kb on - strand, within H281DRAFT_00781at 868.309 kb on - strand, within H281DRAFT_00781at 868.361 kb on - strand, within H281DRAFT_00781at 868.701 kb on + strandat 869.212 kb on - strand, within H281DRAFT_00782at 869.319 kb on + strand, within H281DRAFT_00782at 869.319 kb on + strand, within H281DRAFT_00782at 869.320 kb on - strand, within H281DRAFT_00782at 869.320 kb on - strand, within H281DRAFT_00782at 869.365 kb on - strand, within H281DRAFT_00782at 869.889 kb on + strand, within H281DRAFT_00783at 869.890 kb on - strand, within H281DRAFT_00783at 870.175 kb on + strand, within H281DRAFT_00783at 870.175 kb on + strand, within H281DRAFT_00783at 870.474 kb on - strand, within H281DRAFT_00783at 870.506 kb on + strand, within H281DRAFT_00783at 870.507 kb on - strand, within H281DRAFT_00783

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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867,748 + H281DRAFT_00781 0.25 -1.0
867,916 + H281DRAFT_00781 0.41 -0.3
868,274 - H281DRAFT_00781 0.75 +0.1
868,304 + H281DRAFT_00781 0.77 -0.6
868,304 + H281DRAFT_00781 0.77 +0.5
868,308 + H281DRAFT_00781 0.78 -0.5
868,308 + H281DRAFT_00781 0.78 +0.4
868,309 - H281DRAFT_00781 0.78 -3.3
868,309 - H281DRAFT_00781 0.78 +0.3
868,361 - H281DRAFT_00781 0.83 -1.7
868,701 + -0.1
869,212 - H281DRAFT_00782 0.64 +0.8
869,319 + H281DRAFT_00782 0.75 +0.8
869,319 + H281DRAFT_00782 0.75 +0.0
869,320 - H281DRAFT_00782 0.75 +0.9
869,320 - H281DRAFT_00782 0.75 +1.2
869,365 - H281DRAFT_00782 0.80 +3.0
869,889 + H281DRAFT_00783 0.29 -0.1
869,890 - H281DRAFT_00783 0.29 +1.6
870,175 + H281DRAFT_00783 0.56 +1.3
870,175 + H281DRAFT_00783 0.56 -0.6
870,474 - H281DRAFT_00783 0.83 +0.1
870,506 + H281DRAFT_00783 0.86 -1.6
870,507 - H281DRAFT_00783 0.86 -0.5

Or see this region's nucleotide sequence